Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4490 ATGACCCGATTGACGGAGAAGCTCCGTTTGTCTTTCTTCATACCGACCCGTTTTCTCTCTCTTCTTTCTCTCTCCTCTACTCTCAATCTCTGCAAGTCCTTTGCTCGTTTTCTACACTCCCAAACCCTACTTCCTTTCTTCTCCATGGACAACAATCTCTTCTCCGATAACATCGATTACTTCTCCGATGACATTGAATCCTCTTACTCCCTCCGCCCTAATCGTCGTTTACCCGACTCCGATCACCGCGATTTCGCCCTCGATAGGGTTTACCTTCTCCCCTACAGGTGGTGGATTGATGCAGAAGGTGAAGGTGATCGTGTGGAAGGTGTTTTGTATACAGTGTGTTCGAATAATGATTCAGAGTCCGAAATTTTGCTTCATCTAAAAAAGGAAGAGGATCGTGAGAAGATTAAGAGTTTGGAGGTAGGGTTTTCCGGGCGTCATTATGCTTTGGTTCCTGAAGGACTTTGGTTGCGTGCTCTCAAACGGTATAATGATTTTAACAATGAAGCGAAAGATTCTGGGAGACTCTTGTATGCAGAGGATTGTTTGCCAGATTTGTTCCCCTTGCAACTTAGGATATTTGTTTCATGGGAAACCAGTTCACTGGTAGCAAAGATAAGCGAAAAGGAAAATGTGCCTGACTTCTACAAGAAAGCTTGTGACATTTTCGATGCTGCATATAACTCATTGTATATTTGGGACTTCTCTGGGCAGACAACCCAGCTTTTAATAAATGACAAAGCTAGGGTGCCAAATGATTCTCCCGGTCAACCTGGAAAAGAGGTTCTTCTGGAGTTACAAGTTCACGGACTTTCAGATTCAATGAGGCGTAGTCAGAGCAATGGGATGATTTTAGATAGGTCTCAGATGGAATGTTCTTCTAACAGAGACCCTGTTACGATGAATGGAAGCCTTGATAATGTTATCCCCTATGTAACCGCAAACAACTATTTTCAAGGCAGTAGCTATAGAGCAGTTCGAGCTTTGGGCTTGACAGGATTACATAATCTTGGAAATACCTGTTTTATGAATAGTGCCATTCAGTGTTTAGCTCACACCCCAAAGCTTGTTGATTTTTTCCTTGGAGATTATCGTAGAGAGATAAATTATGAAAATCCCTTGGGAATGAATGGAGAACTTGCTTTATCTTTTGGAGATTTACTTAGACAGCTGTGGGTTCCTGGAGCATCACCTGTGGAACCAAAAATGTTCAAGATGAAACTAGCTAACTTTGCTCCTCAGTTCAGTGGATATATGCAGCATGATTCTCAAGAACTGCTTGCTTTTTTGTTAGATGGACTGCATGAAGACCTTAATCGTGTAAAACGCAAGCCATATCATGAAGTTAAGGATGCAGATGGTCGTCCAGATGGAGAAGTGGCAGAAGAGTATTGGCGAAATCACCTTGCTCGCAATGACTCAATAGTAGTTGATTTGTTCCAAGGTCAGTTCCGGTCGACATTGATTTGCCCTTTTTGCGAGAAGGTTTCTATCACTTTTGACCCTTTTATGTACCTATCTCTGCCATTACCTTCTACAACGATACGGACCATGACTGTGACTGTCATGAGCACTGATGGGATCACACTGCCTTCTGCAATTACCGTAACAGTGCCTGAATGTGGAACAATTAAGGATCTTATTGGGGCTTTAACTGCTTCTTGTTCTCTGAGAGAGGATGAAACCCTCTTGGTGGCTGAGATATACAGGAAAAAGATTTTTCGGGTATTGGAGGATCCATCTGACTCATTATCTGATATTAGAGATCAAGACAAACTTGTCGCTTACCGAGTGCAGAAGTATACTGAAGATAGCATCTTGGTTGTTTTCATGCATGAACGTTTGGTGGAAATTTACAAGAAGAGGTTTGAAAATAGAATGTTTGGCTTTCCACTTGTAGCGAGGCTGTCCGGTATTTCTTGCGGATCTGATGTTCGTAGGGAGTTTCTGAATTTAATCAATCCATTTCTGATGCAAAATACTGAAGAAACAATAGATGAATATGACAAGGATGACAATGTTGTTGATGATGATACTAAAAAACAAAATGAAGTTGAAGAATTATTAGGCGAAACTAATAACTCTGAAGCAATAGAAAGTGATGCAGTCTCAAGTAGTGGAGCAGAGGATGACATACACTTGTGCACTGACTTCGAATTCTATTTATTACTTTCCGAGAGAGGAAGTGAGTTTTTTAAGATAACATCGAATGAACCATTACCTGTCACAATGTTGTCCAGAAATCTGGAGGTACTTGTCGTATGGTCAGATAAGATGCTTAAAAAGTATGACATGAACCTGCTTGATTCATTGCCTGAGGTTTTCAAGCCCCAATTATTCACTAAGAGAACACAAGAATCAATATCTATTTACAAGTGCCTTGAAGCCTTCTTGAGAGAGGAACCTCTTGGGCCAGAAGACATGTGGTACTGTCCTACCTGCAAAAAACCTCAGCAAGCAACTAAAAAGTTGGACCTTTGGAGATTGCCTGAAATCCTTGTTGTTCATTTGAAGAGATTCTCATACAACCGATTTTTCAAGAACAAGCTGGAAACTTTCGCTGACTTCCCAATTAATGATCTGGATTTGTCAACCTATGTCGCTCACGGGAGTTTTCCATCTCCCAACTGCTATATGTTATATGCAATTATTTGTCACTATGGCGGGTTAGGAGGAGGTCACTATACAGCGTTTGTCCGTTATGACCATGATAAATGGTATGAGTTTGATGATAGCAGGGTCGCCCCTGCTGATGAGGAGACGATAAAGACTCCTGCTGCTTATGTCCTTTTCTACAAGAAAGTTTAG 2814 0.4133 MTRLTEKLRLSFFIPTRFLSLLSLSSTLNLCKSFARFLHSQTLLPFFSMDNNLFSDNIDYFSDDIESSYSLRPNRRLPDSDHRDFALDRVYLLPYRWWIDAEGEGDRVEGVLYTVCSNNDSESEILLHLKKEEDREKIKSLEVGFSGRHYALVPEGLWLRALKRYNDFNNEAKDSGRLLYAEDCLPDLFPLQLRIFVSWETSSLVAKISEKENVPDFYKKACDIFDAAYNSLYIWDFSGQTTQLLINDKARVPNDSPGQPGKEVLLELQVHGLSDSMRRSQSNGMILDRSQMECSSNRDPVTMNGSLDNVIPYVTANNYFQGSSYRAVRALGLTGLHNLGNTCFMNSAIQCLAHTPKLVDFFLGDYRREINYENPLGMNGELALSFGDLLRQLWVPGASPVEPKMFKMKLANFAPQFSGYMQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDADGRPDGEVAEEYWRNHLARNDSIVVDLFQGQFRSTLICPFCEKVSITFDPFMYLSLPLPSTTIRTMTVTVMSTDGITLPSAITVTVPECGTIKDLIGALTASCSLREDETLLVAEIYRKKIFRVLEDPSDSLSDIRDQDKLVAYRVQKYTEDSILVVFMHERLVEIYKKRFENRMFGFPLVARLSGISCGSDVRREFLNLINPFLMQNTEETIDEYDKDDNVVDDDTKKQNEVEELLGETNNSEAIESDAVSSSGAEDDIHLCTDFEFYLLLSERGSEFFKITSNEPLPVTMLSRNLEVLVVWSDKMLKKYDMNLLDSLPEVFKPQLFTKRTQESISIYKCLEAFLREEPLGPEDMWYCPTCKKPQQATKKLDLWRLPEILVVHLKRFSYNRFFKNKLETFADFPINDLDLSTYVAHGSFPSPNCYMLYAIICHYGGLGGGHYTAFVRYDHDKWYEFDDSRVAPADEETIKTPAAYVLFYKKV* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4490 937 Pfam Ubiquitin carboxyl-terminal hydrolase 334 934 IPR001394 GO:0004843|GO:0016579
Mal3g4490 937 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 334 937 IPR028889 -
Mal3g4490 937 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 59 937 - -
Mal3g4490 937 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 335 350 IPR018200 GO:0004843|GO:0006511
Mal3g4490 937 SUPERFAMILY Cysteine proteinases 332 936 IPR038765 -
Mal3g4490 937 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 880 897 IPR018200 GO:0004843|GO:0006511
Mal3g4490 937 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 59 937 - -
Mal3g4490 937 Gene3D Cysteine proteinases 321 566 - -
Mal3g4490 937 CDD Peptidase_C19R 790 935 - -
Mal3g4490 937 Gene3D Cysteine proteinases 621 937 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4490 Mal-Chr3 124761791 124770252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4490 788 937 Miscellaneous Gene Families AT2G24640 33.987 1.57e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4490 - K21343 cam:101507058 1594.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4490 3 124761791 124770252 Mal3g4490 3 124761791 124770252 ECH