Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4476 ATGGATCCGGCGAAGACGCCGTTGGGACAAATGCTACAGGATGAAATTACGCCGGTAGTGATGGTCCTTTCCACTCCTACCGTCGAAGAAGCTTGCTTGAAAAACGGTTTCTCGTTTCTTCAGATGCTCACTCCGTTTTGCTCCTTCAACAACATTGACGTGCCAGTGAGAACTGCGAGTGATCAACCTTATCGGATTCATAAATTCAAATTGCGTCTATTCTATGGTTCTCATGTTAGGAAGCCTGATTTGAAGGTAGCTCAAGAGCAGTTGAATCAAGTTATCACTGACTCGGGGGAGAAAGTGTTTTCAGAGTTGTGCTCGGATGTGTCGGAAATCAATCATGAAATTGCGAGCTCTGAAGACAAAGATACACCATCGTGGTTTCAGTTTTTCAATAAAGAGCTTGTCCGCATGGCTTCCTTTTCAGACCACGAAGCTTTTGACCATCCCGTGGCTTGTATTTTAGCTGTTTCTTCAAAAGATGAACATCCAATGAGCAGATTTGTTGATCTTTTTAATACCAACAAGCTTCCTTCCCTTCTTAAAGATGGTGCAATGGATCCAAAGATTTTAAAGCATTACTTGTTAGTGCACGACAATCAAGATGACGCCGCAGACAGCAGAGCAAGTAAAATATTGACAGAGATGAGGAGTACATTTGGTACAAGCGACTGTTCGTTGCTTTCTATTAATTCTTCTTCAGATGTTCCAATCAAGCATCAAGATAATCCTTGGGCTTCACAAATATGTGATGCCTCACTTAATCAAGATCTTGGTTGCTTTCTTAACATTGACGATATCAATGAGATCAAAGATATAATGCAAAACTTATCATCTAAGCACATCATTCCTAACATGGAGCAAAAAATCCGTGTGCTCAATCAACAGGTTTCTGCAACACGTAAAGGTTTTAAAAACCAAATAAAGAATTTATGGTGGAGAAAAGGGAAAGAAGACGTTGTAGATTCTCTCAATGGTCCTACGTATAACTTTAACTCAATTGAATCCCAGATTCGAGTTTTGGGTGACTATGCTTTCATGTTACGAGATTATGAACTCGCCTTGTCAAATTATCGCCTAATTTCGACAGATTACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGTGTGCAGGAAATGATGGGACTTACTTACTTCATGTTGGATCAATCAAGAAAAGAAGCTGAATATTGCATGGAAAATGCTTTTAACACATATTTAAAACTTGGATTATTGGGTCAGCAAAATGCTACACGATGTGGTCTGTGGTGGATAGAAATGTTGAAGGCACGAGACCTATATAAGGAGGCAGCTACAGTTTACTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCCGTGATGCTTGAACAAGCATCATACTGTTATTTGTTGTCTAAGCCCTCCATGCCACGCAAATATGGATTTCATCTAGTTCTTTCTGGTGAGCAGTATAAAAAGTGTGATCAGATCAAACATGCAATTCGAACATACAGAAGTGCTCTTTTTGTTTTTAGAGGAACTACTTGGAGTTATATCAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGATGTAGCTGTCAAGCATATGATGGAAATCTTGGCTTGTAGTCACCAGTCCAAGACGACGCAAGAATTATTCCTGGGTGACTTTCTTCAAGTTGTGGAGAAAACAGGGCGGACATTTGAGGTAACAAAACTTCAATTGCCTGTGATCAACATCTCTTCGCTCAAGGTCATCTTTGAAGATCACCGAACTTTTGGATCACCTTCAGCTGCTAACACTAAAGAAAGCTTGTGGCATTCTTTGGAGGAAGACATGATACCATCATTTACTGCTGCCAAGACTAATTGGTTGGAGTTGCAATCAAAGCTGATATCAAAAAAGCACACTCAATCAAATGTTTGTGTTACTGGAGAAGCTGTGAAGGTTAATATTGAATTCATAAACCCTCTGCAAATCACGATTCCCGTATCTGGTGTTACACTTATATGCAAACATTCTACTAGTACTGATGAACTTACATCAGATGAAAAAGAGTTAAGTGTGAAGACTGATAATGAAGTTGAACACTTCAGGGATATGAGCTCATACAATTCCTCCTTTTTGGTATCTGAGGTTGATTTCTCACTACGAGGTGGTGAAACTACCATGGTTCAACTATCAGTGACTCCCAAGGAAGAAGGTACGCTTGAAATTCTTGGTGTTCGATGGAAACTATCAGGTACTATAGTTGGCTTTCACAACTTTGAGTTGAGCCACCCAAAGAAGAGTATTGTAAAAGGAAGAAGGAAAGCAAAGCAGTCGCCTAATGAGAAATTTAAATTTATGGTGATCAAGAGCATACCCAAGATTCAGGGTTCCGTTCACTCTTTACCTGGAAAGGCATATGCCGGAGATTTACGGCAACTTATGCTGGAGTTGAGGAATTCATCAGAGTTTCCTGTTAAGAATCTAAAGATGAAGATAAGCCACCCTAGATTCCTGATTATTGGGAATCAAGAAAATGTGAAATTAGAGTTTCCTGGTTGCTTAACAAAAAAGACAGATTCAGTGCAAAGTAATGCACATGCTAGTCCTAATGTCATGTCTGAAACAGTCTTTTCGTTTCCAGTGGACACTTCAATTCAAGGTGAAACACCCTTATTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCTGGTGATATTTCTCTTTATATGAGCATTTATTATGAGATTGAAGATATATCAAGTGTCATCAGATATCGCACTCTTCGCTTGCATTACAATGTGCAGGTATTACCATCATTAGATGTCTCATTTCAAATCAGTCCTTCTCGATTAAGAATACAAGATTTTCTAGTTCGATTGGATGTTGTTAACAAGACGAGCTCAGAAAGTTTCCAAGTTTATCAGTTATCATCTATTGGGCATCACTGGGAAATATCATTACTTCAACCTCCTGATACAATTTTCCCTTCGCAAACGTTGATGGCTGGTCAAGCCATATCATGTTTCTTCACATTGAAGAATTCAAGGAGATTATCGACATCGGAATACAACATATCTACCATACCTGTTGGAAGTGATGTGTTATTGGTTCCTCAATGCAGTCAGGATTTAGTTTTCAATACGAACAATGTACCTTTGGTCAATTTCCACTATAATGAAAGATTGCAGCAGAAAGTGTCGCATGAGGATCTGGGTGACTTAAATACCGTTGATTTTGTGTTGATCTCTCGGCCTCTCAACAGTAGCATCAATCCTGGTTTATCTGATCCGCCTCATGTTATGTCTCACCATACATGTCACTTAAGTACTGCTAGCACGGGCCCCATTTCATGGCTAGTGGATGGACCTCAAACGTTGCATCATGACTTCTCTGCATCCTTTTGTGAAATAAATCTAAAGATGCATCTTTACAATTCATCCGACGCCATTGCTTTTGTATGCATTGACACCATAGATTTTGATGGTAGTGGTGGACATATGAACAGTGTGAACGCGGTTCAATCAGCAACTCCTGATAACCAAGCAGGGTGGCATGATGTCACACCAGCGACTGATCTCAAAGTAACGGCAATTGCTCCCGAAACCCAACCAGGAAAGGCACTACCGTTGGAAAGTGTTTCCCCATACATTTGGTCTGGATCTAGTTCAACCAATATCAACCTGGAGCCCATGTCCTCGGCAGAAGTTCCTCTTCAGATTTGTGTCTTCTCTCCAGGGACGTATGACCTGTCAAATTATGTTTTGAATTGGAAACTTCCATCTCAAGGTCTGGGAGCTAGTGATGAAACAAAGCAGCATTCGGGCAAGTGCCAGGGCTATAAATACTATTTGACTGTGCTCCAGTCCACTTGA 3870 0.4028 MDPAKTPLGQMLQDEITPVVMVLSTPTVEEACLKNGFSFLQMLTPFCSFNNIDVPVRTASDQPYRIHKFKLRLFYGSHVRKPDLKVAQEQLNQVITDSGEKVFSELCSDVSEINHEIASSEDKDTPSWFQFFNKELVRMASFSDHEAFDHPVACILAVSSKDEHPMSRFVDLFNTNKLPSLLKDGAMDPKILKHYLLVHDNQDDAADSRASKILTEMRSTFGTSDCSLLSINSSSDVPIKHQDNPWASQICDASLNQDLGCFLNIDDINEIKDIMQNLSSKHIIPNMEQKIRVLNQQVSATRKGFKNQIKNLWWRKGKEDVVDSLNGPTYNFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLKLGLLGQQNATRCGLWWIEMLKARDLYKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMPRKYGFHLVLSGEQYKKCDQIKHAIRTYRSALFVFRGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMMEILACSHQSKTTQELFLGDFLQVVEKTGRTFEVTKLQLPVINISSLKVIFEDHRTFGSPSAANTKESLWHSLEEDMIPSFTAAKTNWLELQSKLISKKHTQSNVCVTGEAVKVNIEFINPLQITIPVSGVTLICKHSTSTDELTSDEKELSVKTDNEVEHFRDMSSYNSSFLVSEVDFSLRGGETTMVQLSVTPKEEGTLEILGVRWKLSGTIVGFHNFELSHPKKSIVKGRRKAKQSPNEKFKFMVIKSIPKIQGSVHSLPGKAYAGDLRQLMLELRNSSEFPVKNLKMKISHPRFLIIGNQENVKLEFPGCLTKKTDSVQSNAHASPNVMSETVFSFPVDTSIQGETPLLWPLWFRAAVPGDISLYMSIYYEIEDISSVIRYRTLRLHYNVQVLPSLDVSFQISPSRLRIQDFLVRLDVVNKTSSESFQVYQLSSIGHHWEISLLQPPDTIFPSQTLMAGQAISCFFTLKNSRRLSTSEYNISTIPVGSDVLLVPQCSQDLVFNTNNVPLVNFHYNERLQQKVSHEDLGDLNTVDFVLISRPLNSSINPGLSDPPHVMSHHTCHLSTASTGPISWLVDGPQTLHHDFSASFCEINLKMHLYNSSDAIAFVCIDTIDFDGSGGHMNSVNAVQSATPDNQAGWHDVTPATDLKVTAIAPETQPGKALPLESVSPYIWSGSSSTNINLEPMSSAEVPLQICVFSPGTYDLSNYVLNWKLPSQGLGASDETKQHSGKCQGYKYYLTVLQST* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4476 1289 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 187 519 IPR024420 -
Mal3g4476 1289 Gene3D Tetratricopeptide repeat domain 329 554 IPR011990 GO:0005515
Mal3g4476 1289 PANTHER TRANSPORT PROTEIN TRAPP 8 1288 IPR024420 -
Mal3g4476 1289 SUPERFAMILY TPR-like 429 551 IPR011990 GO:0005515
Mal3g4476 1289 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 637 830 IPR013935 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4476 K20305 - gmx:100809666 2169.43