Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4428 ATGGGTAACGCTCAGTCTCCTCCCACTGATCCACGATATCTTTCAGCATCCAGAGCTTTTACTCAAAAGGGACTTGAAAACTTAAAGTCTCTATTCGATTCATTAGCATCTCAATCACAGAGCAATGGAAAATTTATTTCTCCTTCAATTTTTCAGTCATATTTCAAACTTAATGGACCGATTGGAGAGAGGATGTTTGATTTAGTGACTCAGGAGCGCAAGGATCAAAAGTTAACCTTTGAAGACCTTGTTATTACTAAAGCTACTTATGAGAAAGGAACAAAAGATGAAATTGAAGAATTCATTTTTCGCTTATTGGATGTATCAGGAGATAATTTTGTAGGGAGGTCTGATTTGGAATCGGTTATCTTCGCCATTTTTAACGATATATTATGCATAAAAGATTCTGAAGATGGATCAAGTTCAAATCAAGATATTGTCAACATATTTCTGAGTGCTGCAAATTTCTCCATACATGATGAAAAGTGCACTGAGGAGGCTATGTCTTTTGAAGATTTCAGAAGTTGGTGTGCTCATCTCCCAACTGTGAGGAAACTTCTTGGAAGCTTGCTTTTGCCACCTGATTCAGGACGACCTGGTACTCAAATTCCTAATCTACTGACCCCGAAGGGTATTGATTCTAACACTGTACTTTTGAGAAAGGAGTATGCTTGGCATATAGGAGGAGCACTTTCCCAGCACGAGATGGAAGATTGGATGCTTTTGTATCATAGTTCTGTTAATGGTCTTAGTTTTAATACATTCTTGGGCAACATTTCAAATCATGAAGGCCCAACTGTGCTAATTATTAAGGATAAAGATGGTTATATATATGGAGGATATGCTTCTCAACAATGGGAGCGGCATGCTGAATTTTATGGAGACATGAAATGTTACATTTTTCAACTAAATCCAAAGGCATCTATATTCAGGCCGACGGGAGCAAACACTAATCTACAATGGTGTGCTGTCAACTTCAGTTCAGAGGAAATTCCAAATGGCATTGGTTTTGGGGGAAAAGAAAATCACTTTGGGTTATTTATCTCAGCAAACTTTGATCAAGGGCATACATTTTCATGTTCTACATTTGGTAGCCCTTGCCTCTCCAAAACTAGCCGTATAATACCTGAAGTAATAGAATGCTGGGGAGTGACTCAAGGTGTTGCACAAGGCAAGAATGATGCTGTTAAGGGAACTGTACTTGAGAGGTTTAAGGAAGATCGGCACATGCTCAATATGACGTCTTGCAGGATCAGGCGTAGTTGCTCGGTGAGTTCTTAG 1281 0.3903 MGNAQSPPTDPRYLSASRAFTQKGLENLKSLFDSLASQSQSNGKFISPSIFQSYFKLNGPIGERMFDLVTQERKDQKLTFEDLVITKATYEKGTKDEIEEFIFRLLDVSGDNFVGRSDLESVIFAIFNDILCIKDSEDGSSSNQDIVNIFLSAANFSIHDEKCTEEAMSFEDFRSWCAHLPTVRKLLGSLLLPPDSGRPGTQIPNLLTPKGIDSNTVLLRKEYAWHIGGALSQHEMEDWMLLYHSSVNGLSFNTFLGNISNHEGPTVLIIKDKDGYIYGGYASQQWERHAEFYGDMKCYIFQLNPKASIFRPTGANTNLQWCAVNFSSEEIPNGIGFGGKENHFGLFISANFDQGHTFSCSTFGSPCLSKTSRIIPEVIECWGVTQGVAQGKNDAVKGTVLERFKEDRHMLNMTSCRIRRSCSVSS* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4428 426 SMART 109ultra 216 385 IPR006571 -
Mal3g4428 426 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 413 - -
Mal3g4428 426 Pfam TLD 241 384 IPR006571 -
Mal3g4428 426 ProSitePatterns EF-hand calcium-binding domain. 107 119 IPR018247 -
Mal3g4428 426 SUPERFAMILY EF-hand 5 189 IPR011992 -
Mal3g4428 426 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 413 - -
Mal3g4428 426 Gene3D - 1 189 - -
Mal3g4428 426 ProSiteProfiles TLDc domain profile. 217 385 IPR006571 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4428 102 414 EF-hand Containing Proteins AT5G06260 61.076 2.19e-143 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4428 - - gmx:100804508 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4428 3 123865367 123874763 Mal3g4428 3 123865367 123874763 ECH