Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4426 ATGGCTTCAATTGGCAAAAGGCTTGAAGGTAAAGTAGCAATAATCACAGGAGGTGCAAGTGGAATTGGTGCAGCCACTGCTAAACTATTTGTTCAACATGGTGCTAAAGTAATAATTGCTGATATTCAAGATGAATTAGGCCAATCCCTTTGCAATGAACTTGGCACAAAAAACATTCTCTATGTTCATTGCAATGTAACCATTGAATCAGACATCATAAACGTGGTTGATACCGCAGTTTCAAATTATGGTAAGCTTGACATCATGTTTAACAATGCTGGTACCTCTGATGACAAAAACAGAGAAATATTGAATTATGATAGTGAAGCTTTCAAAAGTGTATTTAATGTTAATGTTTATGGAGCTTTCTTGGGTGCTAAGCATGCTGCTAAGGTAATGATTCCAAAAAAAAAAGGTGTTATTCTTTTCACTGCAAGTGTTGCTACAGCAACTGCTGGTGAATCAACACATGCATATTCTTCATCAAAGCATGCATCAGTGGGACTTATGAAGAATTTGTGTGTAGAATTAGGACAACATGGGATTAGAGTTAATTGTATTTCACCAGGAGCTATTCCTACTCCAATTCTAACCAATGCATTGAATATGAACAAGAGTGAGATGGAGCAAGTTTTGTCATCAGTTGGTGTGTTGAAAGAGGCTATTCTTGAAGTTGAGGATATAGCTGAGGCAGCACTTTATTTGAGTAGTGATGCTTCAAAGTTTGTGAATGGAGTCAATCTTGTTTTGGATGGAGGTTATAGCACTACCAATTTGTCATTCACAAAAGCACTTATAAATTGTTTGATGAATGGCACCACTAACCACATTGATCAGTAA 840 0.3667 MASIGKRLEGKVAIITGGASGIGAATAKLFVQHGAKVIIADIQDELGQSLCNELGTKNILYVHCNVTIESDIINVVDTAVSNYGKLDIMFNNAGTSDDKNREILNYDSEAFKSVFNVNVYGAFLGAKHAAKVMIPKKKGVILFTASVATATAGESTHAYSSSKHASVGLMKNLCVELGQHGIRVNCISPGAIPTPILTNALNMNKSEMEQVLSSVGVLKEAILEVEDIAEAALYLSSDASKFVNGVNLVLDGGYSTTNLSFTKALINCLMNGTTNHIDQ* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4426 279 Pfam Enoyl-(Acyl carrier protein) reductase 17 255 - -
Mal3g4426 279 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 256 IPR036291 -
Mal3g4426 279 Gene3D - 2 270 - -
Mal3g4426 279 PANTHER SECOISOLARICIRESINOL DEHYDROGENASE-RELATED 2 267 - -
Mal3g4426 279 CDD secoisolariciresinol-DH_like_SDR_c 7 255 IPR045309 GO:0016616
Mal3g4426 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 IPR002347 -
Mal3g4426 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Mal3g4426 279 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 IPR002347 -
Mal3g4426 279 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 2 267 - -
Mal3g4426 279 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 146 174 IPR020904 GO:0016491
Mal3g4426 279 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Mal3g4426 279 PRINTS Glucose/ribitol dehydrogenase family signature 133 149 IPR002347 -
Mal3g4426 279 PRINTS Glucose/ribitol dehydrogenase family signature 218 238 IPR002347 -
Mal3g4426 279 PRINTS Glucose/ribitol dehydrogenase family signature 159 178 IPR002347 -
Mal3g4426 279 PRINTS Glucose/ribitol dehydrogenase family signature 180 197 IPR002347 -
Mal3g4426 279 PRINTS Glucose/ribitol dehydrogenase family signature 12 29 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4426 Mal-Chr3 123842281 123843511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4426 8 253 Acyl Lipid Metabolism Gene Families AT3G12800 32.075 4.40e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4426 - - aprc:113863381 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4426 3 123842281 123843511 Mal3g4426 3 123842281 123843511 ECH