Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4425 ATGTGCACCTCTGCCCCGCCGGTCCTTAAACGGGCATATTATAATCGGAGTAGATACCACCCCTGCTACCGACGCGGCGCCTCACTAGAAGGAAAAGTGGCGTTGATAACCGGAGGAGCTAGTGGAATTGGCAAACGCACTGCAGAAATTTTTGCCCAACAAGGAGCCAAAGTAGTGATCGCTGACATCCAAGATGAACTTGGACATTCGGTTGCTCAAACCATAGGATCGTCAACATGTATATACGTACATTGTGATGTCACCGATGAGAGCCAAATAAAAAATGCCGTGGACACAACCGTACAAACATATGGAAAACTCGACATCATGTTCAACAATGCTGGCATAGGCGGCCCTAACAACTCTCGGATCATCGATAACGATAAAGCAGATTTCGAACGCGTATTAAGCACCAACGTGACAGGTGTTTTCCTCGGCATCAAGCACGCATCACAAGCCATGATCCCAGCTCGCACTGGTAGCATTATAAGTACTTCTAGCATAAGCTCTTATGTTGGTGGTGCTGCCTCACATGCTTATTGTAGTGCAAAGCATGCTGTGGTTGGTTTAACTAAAAATGCAGCAGTTGAACTTGGACAATTTGGGATTAGAGTTAATTGTGTGTCTCCTTATGCCCTTGCAACTCCTTTGGCAACACAATTTGTTGGATGTAATGATGGTGAGCTTGAAACTACCATGAACATGTTGGCTAATCTTAAGGGTGTGACTTTGAAAACTGATGATGTGGCAAATGCAGCACTTTATTTTGCTAGTGATGATTCGAGGTATGTGAGTGGCCATAATTTGCTCATAGATGGAGGCTTTAGCATTGTTAATCCATCCTTTCACATGTTTCAGTATTCAGATTCTTGA 873 0.4422 MCTSAPPVLKRAYYNRSRYHPCYRRGASLEGKVALITGGASGIGKRTAEIFAQQGAKVVIADIQDELGHSVAQTIGSSTCIYVHCDVTDESQIKNAVDTTVQTYGKLDIMFNNAGIGGPNNSRIIDNDKADFERVLSTNVTGVFLGIKHASQAMIPARTGSIISTSSISSYVGGAASHAYCSAKHAVVGLTKNAAVELGQFGIRVNCVSPYALATPLATQFVGCNDGELETTMNMLANLKGVTLKTDDVANAALYFASDDSRYVSGHNLLIDGGFSIVNPSFHMFQYSDS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4425 290 PRINTS Glucose/ribitol dehydrogenase family signature 201 218 IPR002347 -
Mal3g4425 290 PRINTS Glucose/ribitol dehydrogenase family signature 154 170 IPR002347 -
Mal3g4425 290 PRINTS Glucose/ribitol dehydrogenase family signature 180 199 IPR002347 -
Mal3g4425 290 PRINTS Glucose/ribitol dehydrogenase family signature 33 50 IPR002347 -
Mal3g4425 290 PRINTS Glucose/ribitol dehydrogenase family signature 239 259 IPR002347 -
Mal3g4425 290 PRINTS Glucose/ribitol dehydrogenase family signature 105 116 IPR002347 -
Mal3g4425 290 Gene3D - 22 287 - -
Mal3g4425 290 PANTHER SECOISOLARICIRESINOL DEHYDROGENASE-LIKE 27 287 - -
Mal3g4425 290 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Mal3g4425 290 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 105 116 IPR002347 -
Mal3g4425 290 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 199 IPR002347 -
Mal3g4425 290 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 167 195 IPR020904 GO:0016491
Mal3g4425 290 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 27 287 - -
Mal3g4425 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 278 IPR036291 -
Mal3g4425 290 Pfam Enoyl-(Acyl carrier protein) reductase 38 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4425 Mal-Chr3 123830356 123831794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4425 29 275 Miscellaneous Gene Families AT4G05530 32.941 2.25e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4425 - - gmx:100802915 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4425 3 123830356 123831794 Mal3g4425 3 123830356 123831794 ECH