Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4412 ATGTCTCAGACTAAGAAATTAACGCCGAATCTGGATCAACACAGCACGAAGATGCTCAATCTCACTGTGCTCCAACGCATGGATCCATTCATCGATGAGATTCTCTTCACCGCTGCACATGTTTCCTTCTATGACTTCAACATCGAAACTAATCAGTGGAGTCGCAAAGATGTTGAAGGATCTCTGTTTGTTGTTAAGAGGAATGCTCAACCGCGGTTTCAGTTTATTGTGATGAATCGGAGAAATACAGATAATCTGGTGGAGAATCTATTGGATTTTGAGTATGAACTTAAAAAGCCATACCTGTTATACCGGAATGCGTCACAAGAAGTTAATGGTATATGGTTTTACAATCCAGAAGAATGTGAAGAAGTTGCAAATCTCTTTAATAGGATTCTTAATGCATACCCAAAGGCACTTCCAAATGCAACGATGCCTTCTAGCAAAAGTGAGTTTGAGGAACTTGACCAAGTGTCAACCATAAACGAAAGCCCTATCGAGTCATCTTCAGCTGCTGCTACTGCAACTGATGCTGTTGAAGATTCTGTATTCACAAATTTCTTCAACACATGTAAGATTACTGGACCTTATGCTTCAAATGTTGAAAGTTTACACCAGCCCTACCATTCCGCAAGTGTCACTTCTACTGTTCCTGGTGGTTTTTTGTCTCCTGTACCTTCTATTCAAATGCCACCTACCTCTCTTGAAACAATGAACAGTGGCACTCAGGTCACTAATCTTGTTAAGCCTTCTACTTTTCTTGCATCCAACTCTTTATTACCATTGATAGCACCTATTTCTTCACCCGTGCCACCTAGTGCGTCTGTTCATCATTCCCAGAATCTGCCACGCCAATATGGCACTCCACTGCTCCAACCCTTCCCACCACCTAATCCTCCTTCTTCTCTTACCCCCATTTCCAGCTCCATGCCAAATAGACCGGTTATCAGCAGGGATAAAGTCCGCGATGCACTTGTATCACTGGTTCAGGATGATAAATTTATTGACATGATGTTCCAGACGTTATTGAAGATGCAAAACTCATGA 1047 0.4193 MSQTKKLTPNLDQHSTKMLNLTVLQRMDPFIDEILFTAAHVSFYDFNIETNQWSRKDVEGSLFVVKRNAQPRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNASQEVNGIWFYNPEECEEVANLFNRILNAYPKALPNATMPSSKSEFEELDQVSTINESPIESSSAAATATDAVEDSVFTNFFNTCKITGPYASNVESLHQPYHSASVTSTVPGGFLSPVPSIQMPPTSLETMNSGTQVTNLVKPSTFLASNSLLPLIAPISSPVPPSASVHHSQNLPRQYGTPLLQPFPPPNPPSSLTPISSSMPNRPVISRDKVRDALVSLVQDDKFIDMMFQTLLKMQNS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4412 348 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Mal3g4412 348 MobiDBLite consensus disorder prediction 274 315 - -
Mal3g4412 348 MobiDBLite consensus disorder prediction 289 304 - -
Mal3g4412 348 CDD EVH1-like_Dcp1 19 133 - -
Mal3g4412 348 Gene3D - 7 135 IPR011993 -
Mal3g4412 348 SUPERFAMILY PH domain-like 19 138 - -
Mal3g4412 348 PANTHER MRNA-DECAPPING ENZYME-LIKE PROTEIN ISOFORM X1 1 344 - -
Mal3g4412 348 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 1 344 IPR010334 GO:0000290|GO:0008047|GO:0043085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4412 Mal-Chr3 123670859 123674510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4412 K12611 - gmx:100786833 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4412 3 123670859 123674510 Mal3g4412 3 123670859 123674510 ECH