Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4400 ATGTACTATAATGGATATTATCACCTATTCTACCAGTACAATCCAAAAGGATCTGTATGGGGAAATATTGTGTGGGCTCACTCAGTATCAAAGGATCTTATAAATTGGAAATCACTTGAACCCGCTATTTATCCGTCCAAACCCTTTGACAAATATGGATGTTGGTCCGGGTCAGCCACTATTGTTCCGGGTAAAGGCCCTGTGATCCTTTACACCGGAATTATTGACGAAAAAAACACTCAAGTTCAAGTTTATGCTATACCCAAAGATTTATCCGACCCATTTCTTAGAGAATGGGTAAAACCCGATAAGATCAACCCAATTGTGATTGCTGAAAAAGGCGTTAACGGTAGCGCTTTTCGTGATCCCACAACTGCTTGGATGGGTAAAGATGGACGTTGGAGAATGTTGGTTGGTAGTAGAAGAAATCGTAGAGGGATGGCCTACTTGTATAGGAGTAGGGATTTTGTGAAATGGGTTCGGGCCAAACACCCAATCCATTCAAAAACTACTACGGGTATGTGGGAGTGCCCTGATTTTTACCCGGTTTCATTGAAAGGTAAAGAAGGGTTGGATACATCAATTGAAGGTAATCATGTTAAACATGTCTTAAAGAATAGTCTTGACGTAACTAGATTTGAGTACTATACATTGGGCACATACTTAACTGATAAGGATAAGTATATTCCGAGTAATACTTCAGAGGATGGTTGGGGTGGGCTTAGATATGACTATGGTAATTTCTATGCTTCCAAGTCATTTTTTGATCAAAGTAAGAACCGTAGGATACTTTGGGGTTGGGCTAATGAGTCTGATTCCAAGGATGATGATGTTAAAAAAGGGTGGGCTGGAATTCAGGCAATTCCAAGAACTGTGTGGCTTGATCCTTCTGAAAGACAATTAGTACAATGGCCTGTTGAAGAATTGAATGAACTCAGAGAAAAAGAAGTTAGTATGAACAATCAAAAGCTTGAAAAGGGTAATCATGTTGAAGTAGCTGGAATAACTGCCGCCCAGGCAGATGTGGAAGTTACTTTCTCATTTTCAAGCTTGGACAAGGCAGAGGCTTATGATCCAAGTTGGGTAAATGCACAAGACCTCTGTTCCCAAAAAGGTTCAACAGTTCAAGGTGGCGTTGGGCCTTTTGGGCTTTTGACTTTGGCTTCAGAAAATTTGGCAGAGTTCACTCCTGTATTCTTTAGAATCTTCAAAGCTCCAAACAAACATGTAGTTCTCTTGTGCTCTGATGCGACAAGTTCTTCTCTGACGAGTAAATTGTACAAGCCATCATTTGCTGGATTTGTAGATGTGGATTTAGCTACTAAAAAACTTTCTCTTAGGAGTTTGATTGATCATTCAGTAGTGGAAAGTTTTGGAGAAGGAGGAAAAACAAACATTTTGTCTAGGGTTTATCCGGTACTAGCTGTGACTAATCAAGCTCATTTGTTTGTGTTTAACAATGGTACTGAACCGATTACTGTGGAGAATCTCAAAGCATGGAGTATGAAGTCAGCTGATATAAATTGA 1527 0.3982 MYYNGYYHLFYQYNPKGSVWGNIVWAHSVSKDLINWKSLEPAIYPSKPFDKYGCWSGSATIVPGKGPVILYTGIIDEKNTQVQVYAIPKDLSDPFLREWVKPDKINPIVIAEKGVNGSAFRDPTTAWMGKDGRWRMLVGSRRNRRGMAYLYRSRDFVKWVRAKHPIHSKTTTGMWECPDFYPVSLKGKEGLDTSIEGNHVKHVLKNSLDVTRFEYYTLGTYLTDKDKYIPSNTSEDGWGGLRYDYGNFYASKSFFDQSKNRRILWGWANESDSKDDDVKKGWAGIQAIPRTVWLDPSERQLVQWPVEELNELREKEVSMNNQKLEKGNHVEVAGITAAQADVEVTFSFSSLDKAEAYDPSWVNAQDLCSQKGSTVQGGVGPFGLLTLASENLAEFTPVFFRIFKAPNKHVVLLCSDATSSSLTSKLYKPSFAGFVDVDLATKKLSLRSLIDHSVVESFGEGGKTNILSRVYPVLAVTNQAHLFVFNNGTEPITVENLKAWSMKSADIN* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4400 508 CDD GH32_Fruct1-like 1 294 - -
Mal3g4400 508 SMART glyco_32 1 462 IPR001362 GO:0004553|GO:0005975
Mal3g4400 508 Gene3D - 319 502 - -
Mal3g4400 508 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 507 - -
Mal3g4400 508 SUPERFAMILY Arabinanase/levansucrase/invertase 1 306 IPR023296 -
Mal3g4400 508 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 1 507 - -
Mal3g4400 508 Pfam Glycosyl hydrolases family 32 C terminal 308 501 IPR013189 -
Mal3g4400 508 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 305 IPR013148 -
Mal3g4400 508 Gene3D Glycosyl hydrolase domain; family 43 1 318 IPR023296 -
Mal3g4400 508 SUPERFAMILY Concanavalin A-like lectins/glucanases 305 505 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4400 Mal-Chr3 123536459 123539209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4400 1 503 Glycoside Hydrolase AT3G52600 66.473 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4400 K01193 - gmx:100777418 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4400 3 123536459 123539209 Mal3g4400 3 123536459 123539209 ECH