Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4392 ATGAGCAGGTCTGGGCAGCCACCGGATTTGAAGAAGTACATGGACAAACAGCTTCAAATCAAGCTGAATGCAAATCGTATGATTGTTGGTACTCTCCGTGGCTTCGACCAGTTTATGAATATGGTTGTTGACAATACTGTGGAGGTGAATGGCAATGAGAAAAATGATATAGGGATGGTGGTTATCCGAGGAAATAGTGTGGTCACTGTAGAGGCACTTGAACCAGTGAACAGGACCATCTAA 243 0.4403 MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNMVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVNRTI* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4392 80 Gene3D - 1 76 - -
Mal3g4392 80 SMART Sm3 8 72 IPR001163 -
Mal3g4392 80 Pfam LSM domain 9 71 IPR001163 -
Mal3g4392 80 SUPERFAMILY Sm-like ribonucleoproteins 8 75 IPR010920 -
Mal3g4392 80 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 1 79 IPR044641 -
Mal3g4392 80 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Mal3g4392 80 PIRSF Lsm7 5 79 - -
Mal3g4392 80 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4392 Mal-Chr3 123479194 123480609 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4392 K11099 - gmx:100305530 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4392 3 123479194 123480609 Mal3g4392 3 123479194 123480609 ECH