Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4391 ATGACAGAAGTGCTTCAATTACCTTCACCTTCAAGCTGTTCTTCAAGTCCATTCAATGATGCATCGCACTCACAACAACAACAACAACAACATCACCAAACTAATTCTTCACCTTTTAACAATGAAACTGTCATGACCCATTTCCAGATTCAACAACAACAACAAGAGGAAGAAATAGAAGAAGAAAAAGATAGAGAAAGGGATCAACTTTCTATTTTGACTCTTTTGATTGCTACTTTTAGGAAATCTTTGATTGGTTGTACCAATACTGGTGCTCAACTTTCTTCTTCTTCAATGGAAATTGGTTGGCCTTCTAATGTTCGACATGTTGCTCATGTTACTTTTGATCGTTTTCATGGTTTTCTTGGTTTGCCTGTTGAATTTGAACCTGAAGTTCCAAGAAGACCTCCTAGTGCTAGCACAAGTGTTTTTGGTGTTTCAACAGAATCTATGCAGCTTTCTTTTGATGCCAGAGGAAATAGTGTACCTACAATACTGTTGTTAATGCAAAGACATCTGTATGCACAAGGAGGCCTGCAGGCCGAAGGAATCTTCAGAATTAATGCTGAAAATAGTCAAGAGGAGTTTGTGAGGGAACAATTGAACAGAGGAGTGGTACCGAATGGCATTGACGTGCATTGCTTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTTCCAACTGGAATATTAGACCCTCTTTCGCCGGAGCAGGTGATGCAGTCCCAGTCAGAAGAAGAATGTGCTCAGCTTGTAAGGCTTCTTCCTCCAACAGAAGCTGCCCTCCTAGATTGGGCCGTAAACCTAATGGCAGACGTTGCTCAGATGGAACATTTGAACAAGATGAACGCACGTAATATTGCAATGGTTTTTGCACCAAACATGACTCACATGGTAGATCCTTTGACTGCTCTGATGTACGCGGTACAAGTCATGAATTTCCTCAAGACTCTAGTAGTAATGACACTGAAAGAAAGAGAAGAATCAATCACAAAATCAAATCCCTCTTCAAACCTAAATTCTTTTGATGACGACGGGCATCAGAGCGATTCACAAGCGCTTTTCAAGGATGACAGTGAATACGGAAATGATTATAGCGACGAGGACACAGTTTTTGCCAGCTCCGAACCTTCACAACAAAGCCCTGCATATCTTTTTAAAGATGGCTGTGAAACTGAAAGTGGATCCAAAAGTCTGCAAACATCTACTGAAAATTTCATTTCTAGTGGAAATAGGTTGCTGGTTGACAGTTGTCCTTGCGGCGTTGTCTCTCAAATTTGCTCTCTGGCAATTGGGGATCAAGCAAAAATTTGCAACAACAAAAGCCTTCAGTTGAGTACTTCTGATACAGAGAAGTGTTCATCAGGACCAATGGAGATGAATAGAGGAATTGGGCTTATTGGTCGGATAAATTCAAGATCTGAGTTGGCTGAAGCTTGGCGTTGA 1446 0.4108 MTEVLQLPSPSSCSSSPFNDASHSQQQQQQHHQTNSSPFNNETVMTHFQIQQQQQEEEIEEEKDRERDQLSILTLLIATFRKSLIGCTNTGAQLSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENSQEEFVREQLNRGVVPNGIDVHCLAGLIKAWFRELPTGILDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAVNLMADVAQMEHLNKMNARNIAMVFAPNMTHMVDPLTALMYAVQVMNFLKTLVVMTLKEREESITKSNPSSNLNSFDDDGHQSDSQALFKDDSEYGNDYSDEDTVFASSEPSQQSPAYLFKDGCETESGSKSLQTSTENFISSGNRLLVDSCPCGVVSQICSLAIGDQAKICNNKSLQLSTSDTEKCSSGPMEMNRGIGLIGRINSRSELAEAWR* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4391 481 MobiDBLite consensus disorder prediction 1 40 - -
Mal3g4391 481 SMART PBD_5 101 135 IPR000095 -
Mal3g4391 481 Gene3D Rho GTPase activation protein 134 333 IPR008936 GO:0007165
Mal3g4391 481 CDD RhoGAP 163 318 - -
Mal3g4391 481 CDD CRIB 99 139 - -
Mal3g4391 481 MobiDBLite consensus disorder prediction 329 359 - -
Mal3g4391 481 SMART RhoGAP_3 160 323 IPR000198 GO:0007165
Mal3g4391 481 PANTHER MKIAA1688 PROTEIN 1 481 IPR044785 GO:0005096
Mal3g4391 481 ProSiteProfiles Rho GTPase-activating proteins domain profile. 146 331 IPR000198 GO:0007165
Mal3g4391 481 Pfam RhoGAP domain 163 297 IPR000198 GO:0007165
Mal3g4391 481 ProSiteProfiles CRIB domain profile. 101 114 IPR000095 -
Mal3g4391 481 Gene3D CRIB domain 95 130 IPR036936 -
Mal3g4391 481 Coils Coil 45 69 - -
Mal3g4391 481 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 1 481 - -
Mal3g4391 481 Pfam P21-Rho-binding domain 100 127 IPR000095 -
Mal3g4391 481 MobiDBLite consensus disorder prediction 332 348 - -
Mal3g4391 481 SUPERFAMILY GTPase activation domain, GAP 140 320 IPR008936 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4391 Mal-Chr3 123462822 123467156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4391 - - gmx:100783118 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4391 3 123462822 123467156 Mal3g4391 3 123462822 123467156 ECH