Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4380 ATGAAAAAGCATTTACTAAAACCAATTACAAAACCACCACCACCACCAATCCTCAACCCACCACCACCGCCACCACAACCACAAAACCCATCACTCTTCCCTCCCACACAACACTACACCCACTTCCTCCAATTCCTCAACCACCACCTCACCCCACCTCTCACTCCACAAACCCTCACCCACTTCCTCAAATCCAAACTCCACCACCACCCTTCCTTCACCCACTTCGACTTCCATCTCTTCTCTTGGGCTTCCACCCTCGACACTTTCTCTCACAACCACACTTCTTACCAATGGATGACACGTACCCTCGCTCTCTCTCATCGTTTCTCTCTCCTCCGTACCCTCCTCATCTTCATCTCCACCAACCCCTGCCAATGCTCTCAAGCCATCTTCTCTTGCCCACAAACCGAACCCATTTTCCGGTTTGCAATTCAGTCTTATTGCAAAGCTTTCAAATTTGATGATGCTGTTTTTGCTTTTAATGTTATGCGTAGGTTAATCGATGGAAAGCCGAGTGTTTCGGTTTGTAATATTTTGATTCATGGGTTTGTTAAATCTGGTAGATTTGATAGAGCTTTTGAGTTTTATAATGAGATGATTATGGATAGGGTTAAGCCTGATGTGTTTACTTTTAATATTTTGATTAGTGGTTATTGTAGGAATTTTAAATTTAGTTGTGCATTGGAGATGTTTGATGAAATGCGGAAAATGGGGTGTCATCCAAATGTTGTTACTTTTAATACTTTGATTAGAGGGTTGTTTAGGGAAGGTAGGGTTGATGAAGGGATTGGGATGGTTTATGAGATGATTGAATTGGGGTGTCAGCTTTCTGATGTTACTTGTGAGATTTTGGTTGATGGGCTTTGTAAGGAAGGTCGGGTTTTGCAGGCATGCGATTTGTTGATGGAGTTTTCGAAGAGAGAGGTTTTGCCTAAAGGGTATGATTATTTTGTTTTGGTGGAAATTTTGTGTGGGAAAGGAGATGCTTTTAAAGCTTTGGAGGTTATTTATGAGTTGTGGAGCAAAGGTTGTGTTCCTAGCTTGATTTCTTGTATTGTGATCATTGATGGTTTGAGAGGATTGGGGAAGATTGAAGAGGCAATGAGATTTGTGGAAAAAATGCTTAAAGACGAGGGGATGGTACTTGATGTTGTGACTTTCAATTCTGTCCTTCAAGATCTTTGTGATGTGGGAAGGACTGAAGAGGCAAACAGGTTGAGATTACTTGCTTCAAGCAAGGGTTTGGAACCCGATGCCATGACTTATAAAGTTCTTGTTGCTGGGTATAGAGGAGAGGGAAATCGAACGGAAGGAGAGTTAGTGGTAAATGAAATGTTGGATAGAGGGTTTTTACCCGATCTTGCTTCATATAATAAATTGATGGATGGACTATCTAATTGTCAACGCTCCAGGCGTTATCAAATGAGCAAAATTGGCAGCTGA 1446 0.4184 MKKHLLKPITKPPPPPILNPPPPPPQPQNPSLFPPTQHYTHFLQFLNHHLTPPLTPQTLTHFLKSKLHHHPSFTHFDFHLFSWASTLDTFSHNHTSYQWMTRTLALSHRFSLLRTLLIFISTNPCQCSQAIFSCPQTEPIFRFAIQSYCKAFKFDDAVFAFNVMRRLIDGKPSVSVCNILIHGFVKSGRFDRAFEFYNEMIMDRVKPDVFTFNILISGYCRNFKFSCALEMFDEMRKMGCHPNVVTFNTLIRGLFREGRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCKEGRVLQACDLLMEFSKREVLPKGYDYFVLVEILCGKGDAFKALEVIYELWSKGCVPSLISCIVIIDGLRGLGKIEEAMRFVEKMLKDEGMVLDVVTFNSVLQDLCDVGRTEEANRLRLLASSKGLEPDAMTYKVLVAGYRGEGNRTEGELVVNEMLDRGFLPDLASYNKLMDGLSNCQRSRRYQMSKIGS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4380 481 Gene3D Tetratricopeptide repeat domain 237 307 IPR011990 GO:0005515
Mal3g4380 481 Gene3D Tetratricopeptide repeat domain 54 236 IPR011990 GO:0005515
Mal3g4380 481 Gene3D Tetratricopeptide repeat domain 308 375 IPR011990 GO:0005515
Mal3g4380 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 208 242 IPR002885 -
Mal3g4380 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 384 418 IPR002885 -
Mal3g4380 481 Gene3D Tetratricopeptide repeat domain 376 478 IPR011990 GO:0005515
Mal3g4380 481 PANTHER ATPASE EXPRESSION PROTEIN 3 8 470 - -
Mal3g4380 481 MobiDBLite consensus disorder prediction 8 32 - -
Mal3g4380 481 MobiDBLite consensus disorder prediction 1 33 - -
Mal3g4380 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 173 207 IPR002885 -
Mal3g4380 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 419 453 IPR002885 -
Mal3g4380 481 PANTHER FERTILITY RESTORER HOMOLOGUE A-LIKE 8 470 - -
Mal3g4380 481 TIGRFAM PPR: pentatricopeptide repeat domain 422 454 IPR002885 -
Mal3g4380 481 TIGRFAM PPR: pentatricopeptide repeat domain 280 312 IPR002885 -
Mal3g4380 481 TIGRFAM PPR: pentatricopeptide repeat domain 176 209 IPR002885 -
Mal3g4380 481 TIGRFAM PPR: pentatricopeptide repeat domain 210 244 IPR002885 -
Mal3g4380 481 TIGRFAM PPR: pentatricopeptide repeat domain 245 278 IPR002885 -
Mal3g4380 481 Pfam PPR repeat 176 203 IPR002885 -
Mal3g4380 481 Pfam PPR repeat 354 378 IPR002885 -
Mal3g4380 481 Pfam PPR repeat 280 308 IPR002885 -
Mal3g4380 481 Pfam PPR repeat 145 166 IPR002885 -
Mal3g4380 481 Pfam PPR repeat family 384 430 IPR002885 -
Mal3g4380 481 Pfam PPR repeat family 207 255 IPR002885 -
Mal3g4380 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 243 277 IPR002885 -
Mal3g4380 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 278 312 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4380 179 475 Miscellaneous Gene Families AT4G11690 30.640 8.83e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4380 - - aprc:113860936 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4380 3 123362693 123364138 Mal3g4380 3 123362693 123364138 ECH