Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4329 ATGGAGTTTGGAGAAACAGAGAAAAAAGAGGCTAATTCAAAGATTCCATGGATGCCCACAACACCATTTAAGCCAATTGCTCAAAGACCAGTGCCGATCTGCACTCCTGGAGAGAGAAATCAGCTCAACTCTCATTTCAATGGTGAATTTCCATGTGTTGGATCTTCAAGCGGTGGAAATGTTAACAGCCGTTCAGAAACTGTGGCTATAGCATCAAACATTGGTCATGACAATGCCAGAACTCGGGTACCGATATCGTTCGATAATCCGAGCTCGAGTAATAGTTTTGCTGAACTTTTGGCTCAGGCAGAGGCTCCTTCTTCATCAGCATATTTTAATTCACCGTATGTATTTTCGGGGAACCAATTTGTTCCTGGTGTGTGGAACTCAGAGTTCAACGAAAGCTATTCATTTCTTGGCAACCACAATCTTTATCAGCAACAACTCTTCAACAATTTTATCAATGACAATTATCAAGATCCTCATGGCACACCATACTTGGCTTATAATAAGACCAATTCCCAGGTTGCTCTGCCTCCAGAAAATAACACAACATCAAAAGGCAAACAAGTTGTGGAGACACAGATAAACATGGAACAAAAGGATCAAAGGGAAGATGAGAGTAATGCCTCAGCCGCTATGTGCAACAATTCACGCAACAAACTTTATGATCCTGTTGTAGACTTGACTGCTGTTTCTACACCATGCAAGGAGAATAAGAACCACAATAATGAAATAAACCATGTTATTGATCTTAATGAAATACCCCAAACAAAACCAAAAAGAAGAAAGCATCGCCCCAAGGTCATAAAAGAAGGCAAGCCCAAAAGAACTCCAAAACCAGCCACTCCAAAGCCTGATCAATCAAAAGAAAACTCAACTCAAAAGAGGAAGTATGCGAGAAAGAAAGAATCAAATGCAACTCCAGCAGAAGTGGCAGGGGAATGCACTGAACCATTGATGTCAGAGTCTGCCAAAAAGACATGTAGAAGGTCCTTACACTTTGACATATCAGAACAAACAAGAGATGGAAATTCTGCATGCAGAGAAGAAAATGCAACTACACGTTTTGGTGGAGATATTGGCATAGAGGTCCTGGAAACACATGCTTTAAATAATCACATGTCATTACAAGAAGATGCACAAGCCTCCAGCAGTAATGGAAAACTTTCGAGTACAGGGTCAAAAGAAGTTGGTTCCAAGAGAAAACCGTCTGATACCATTGAGCAAGCAAACAACAGGAGCATTAATATGATTGGGGCACAATATAATCTAATGCAGGCATACCAATCAAAGTATTGGGTTCAATTTCCTAATGTTCAGAAGAAAAGGAGAAGTGAGAAGGGGAAATTTTCAAATACATCCAATACATCTTCCATGACGGCTATTAAAGATGTACAACTTGCTGCATGCTCTGAAGAAAATACTAGATCACATCCTTATGCATCAACTTCTAATGTGTGGACTACTGCTTCTGCTTCTGAGTATGAAACAGCGCAACTCCTAACCATGCTCAAATCTACTGAAGGAGCCACCCATGACAAATCTCAATCACTCGAGTACAATTTATTTTCAGGACAGAGCAGACCAACCAAAAAAAGATCAAGAGTCACTACCAGAGCTCATGATTACACTTCACTGACCATCATTGGAAACTATGATGCCAAACTAACTAATATTACAAACCCAGGCAGTTCTGATAGACAAACATTTGAGGATGCAGAGAGACCACAAACAGGCATTGATGCTCTAGTTGCGGAGATGCGTGCATCACTCACAAAAAAGAAGCGGAGTAAAAAGAGAAGTATTCCAATCAGTTCGGCATATTCTTGCATAAATGAAATGCAACAGCATATGCCCTTGCACAACTCATTAGGGGTTGCTTGCGGAGAGAGCTGGAAAAACATAGCTACTGTGGACAGATTAACACAGCAGTTTAGACGCCTAAGCATATATAGAGAAGCTAGAGAACTTGTGTTATACGGGCAGAATGCACTCGTCCCTTACAACCGGCAAAATGAAAAACACAAAAGCCGGGTTCATGAAAATGGCACCATCATTCCCTTTGAGGGCTTGTTTGATCCCATCAAGAAACAACGCCCGCGACCTAAAGTTGATCTTGATGAGGAAACCAATAAAGTGTGGAAGCTTCTGATGTTGGCTATAAATAGTCATGGGGTTGATGGAACAGATGAAGACAAGGCCAAATGGTGGGAAAATGAACGAAATGTTTTCCGAGGAAGAGCAGAGTCATTTATTGCACGGATGCATCTTGTTCAAGGAGACAGACGCTTTTCTCGATGGAAAGGATCAGTGGTGGATTCGGTGGTTGGAGTTTTTCTCACTCAGAATGTCTCAGACCATCTTTCTAGTTCTGCATTCATGTCCCTTATTGCTCGATTTCCCCTAAAGTCAAGCAGCATGTTCGATACATGCCACGAGGAAAGTGCAAGCATGATAGTCAACACACCAGAGGTGCAGATTGTGGAACCAGAAGAAAATGGAAAGCTGGAAGAAATAATGTTGAATCAATCTGTTCAAGAATATAGTTCTATGACAAAAGACATCATTGAACATTCAGAAGAAAGAGAAACTGTTGACAGCAACAGCATTGATTCCTGTGGAACTACTGGCAGCTTAAATAGCTTAAAAGATGAATCAAATTGTAAACTGTCAGAACCAGCTCAAAGAAATATTATGGAACATAGTACAATGGAATTTGTTAATCCAGCGACTGGGGAAGGGCGAGAAAATTCATGTCATGGGGGTGTTAGGAAAGAGTTCAATGCTTTACTTTCATCCCATTGCTCCGTTGTTACATCTCAATTGTCTGGAGATTTTTCAATTGATCAAAATCCTGAGAAGATAGGATCATTCTCAGACAGCAACACAGAAGTGGAAGATCGGCTAAGCACAGCTGAATACAATTTTTCCAACAGGACTTCTTTCAGTATGCTTTTAGGAATGGCAAGTTCGACCCAGTTACATGAAGTTAACAGTCAGAGAAGCAATCCAACTGAGAATTTGAGAGATTCATCTGGTCAATTTGTAGCTATGAGGCATGACAACCTGGAAGAGAACTTGGAAAAATCAAATGTTACTCAAAGTTCCTTAGAAGCAATCATGACGCAATGCAATGACCATAATTTGAAAATGACCCTCAACTCTGAAGTCCATGAAGCCAACTTCTATAATCCTATCAATGTCGAAGCCTCATCAAGTGGCTCCTCAAAGAATACAAATGAAAATAACAAAAGCTCTGGTACTCCAGCAGAGTCTGAAAGCCAAGCTGCAATTGCCCATTCTCACAGCATGCTATCCCAAGTTCCTCTTCAGCAACAGAGTGGTCACCAACAGCACAAAGTTTTCCACATTTCTGGACAGAGTAAAGATCTTATGGAGAAATCAAAGGAATCAGATTTTGGTGACCACAACTATGCCATGAGGAATGACAACAGTAAGTTAGATTCTGCCCCTGTAAAAAAAATAAAGGGCAAGGAGCGTGGGAAAGAGAAGAAGGATAACTTCAATTGGGATAGTTTAAGAATACAGGCACAAGCTACAGCGGGAAAGAGAGAAAAGACAGAAAGCACCATGGACTCGTTGGACTGGGATGCTGTGAGACGGGCAAATGTCAAGGAAATTGCTGACGCAATCAAAGAAAGGGGAATGAACAACATGCTTGCTGAACGCATTCAGAGTTTCCTGAATCTACTCGTTGAAAAACACGGGGCTATTGATCTTGAGTGGCTGAGAGATGTTCCACCTGACCAAGCAAAAGAATTCTTGCTCAGCATAAGGGGATTGGGATTGAAAAGTGTGGAGTGCGTGCGACTATTAACACTGCACCATCTTGCTTTCCCGGTGGACACAAATGTTGGGCGTATTGCAGTGCGATTGGGATGGGTACCTCTACAACCGTTGCCCGAGTCACTACAGTTGCATCTTCTGGAATTGTACCCGGTGTTGGAATCCATACAAAAATATCTCTGGCCCCGGCTGTGCAAGCTTGACCAAAAAACATTGTACGAGTTGCATTACCAGCTGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGTCCAATGAGAGGGGAATGCAGACACTTTGCAAGCGCTTTTGCAAGTGCAAGGCTTGCCTTACCAGGACCGGAGCAAAAGAATATAGTTATCGCAACTGGAAACAACGCAACAGATCAGAACCCATCAACTATCATCAATCAGTTGCCTTTGTCTCTCCCAGGACTGGAGCAGAAGAATATTGATATCGCAACTGGAAACAATGCAACTGATCAGAACTCATCAGTAGTCATAAATCAGTTGCCCATGTCTCTCCCTGAGAACACAAACCAAACAGAAGAACTTCAACAAACAGTAGTGATCAGGCAACTTGAAATGAAATCTGAAATCAATAGCTGTCAGCCCATTATTGAAGAGCCAACAACTCCAGAGCCAGAATGCTCCCACGTATCTGAAAATGATATAGAGGATGCTTTCTTTGAGGAATCAGATGAAATTCCAACCATCAAACTAGACATACAAGAGTTCACTTTGAATTTACAAAATTATATGCAAGAAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCCTTGGTTGCTCTAAATCAAGAAGCTGCTCACATTCCTACAACAAAGCTGAAGAACGTGAGTCGGTTGCGCACAGAGCATTCTGTTTATGAACTCCCAGATTCACATCCTCTTCTGGAAGGGTGGGAAAAGCGAGAACCTGATGATCCAGGAAAATACCTTCTAGCTATATGGACTCCAGGTGAGACAGCAAATTCTATACAGCCACCAGAAAGAAAATGCAGCGCTCAGGATTGTGGCCAGCTCTGTAATGAGGAGGAATGTTTTTCATGCAACAGCTTCCGTGAAGCAAATTCACAGATAGTTCGAGGGACAATCCTGATACCATGTCGAACAGCTATGAGAGGGAGCTTTCCGCTAAACGGCACCTATTTTCAAGTCAATGAGGTTTTCGCAGACCATGAATCAAGTCTTAACCCAATTAGCGTTCCCAGAAGTTTGATATGGAAACTCGATAGGAGAACAGTGCATTTTGGAACCTCCATACCAAGCATATTCAAAGGTTTATCAACACAAGAAATTCAACAGTGCTTCTGGAGAGGGTATGTCTGTGTGCGAGGATTTGAAAGGGAAACGCGAGCACCCCGTCCGTTGAAGGCTAGACTACATTTCCCAGTTAGCAAGTTGGCCAAGAACAAGGAGAACACCAGAAAAGATTCAACGGCCGCAAACTCACAAAGATCGAATTCAAAACAAAATGCAGAACCACAACAGCCAGAGTTTCTTGCCAGCATTCCCAACTTGCGACAGAACGGCGGATCCTGA 5394 0.4195 MEFGETEKKEANSKIPWMPTTPFKPIAQRPVPICTPGERNQLNSHFNGEFPCVGSSSGGNVNSRSETVAIASNIGHDNARTRVPISFDNPSSSNSFAELLAQAEAPSSSAYFNSPYVFSGNQFVPGVWNSEFNESYSFLGNHNLYQQQLFNNFINDNYQDPHGTPYLAYNKTNSQVALPPENNTTSKGKQVVETQINMEQKDQREDESNASAAMCNNSRNKLYDPVVDLTAVSTPCKENKNHNNEINHVIDLNEIPQTKPKRRKHRPKVIKEGKPKRTPKPATPKPDQSKENSTQKRKYARKKESNATPAEVAGECTEPLMSESAKKTCRRSLHFDISEQTRDGNSACREENATTRFGGDIGIEVLETHALNNHMSLQEDAQASSSNGKLSSTGSKEVGSKRKPSDTIEQANNRSINMIGAQYNLMQAYQSKYWVQFPNVQKKRRSEKGKFSNTSNTSSMTAIKDVQLAACSEENTRSHPYASTSNVWTTASASEYETAQLLTMLKSTEGATHDKSQSLEYNLFSGQSRPTKKRSRVTTRAHDYTSLTIIGNYDAKLTNITNPGSSDRQTFEDAERPQTGIDALVAEMRASLTKKKRSKKRSIPISSAYSCINEMQQHMPLHNSLGVACGESWKNIATVDRLTQQFRRLSIYREARELVLYGQNALVPYNRQNEKHKSRVHENGTIIPFEGLFDPIKKQRPRPKVDLDEETNKVWKLLMLAINSHGVDGTDEDKAKWWENERNVFRGRAESFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLIARFPLKSSSMFDTCHEESASMIVNTPEVQIVEPEENGKLEEIMLNQSVQEYSSMTKDIIEHSEERETVDSNSIDSCGTTGSLNSLKDESNCKLSEPAQRNIMEHSTMEFVNPATGEGRENSCHGGVRKEFNALLSSHCSVVTSQLSGDFSIDQNPEKIGSFSDSNTEVEDRLSTAEYNFSNRTSFSMLLGMASSTQLHEVNSQRSNPTENLRDSSGQFVAMRHDNLEENLEKSNVTQSSLEAIMTQCNDHNLKMTLNSEVHEANFYNPINVEASSSGSSKNTNENNKSSGTPAESESQAAIAHSHSMLSQVPLQQQSGHQQHKVFHISGQSKDLMEKSKESDFGDHNYAMRNDNSKLDSAPVKKIKGKERGKEKKDNFNWDSLRIQAQATAGKREKTESTMDSLDWDAVRRANVKEIADAIKERGMNNMLAERIQSFLNLLVEKHGAIDLEWLRDVPPDQAKEFLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQKTLYELHYQLITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQKNIVIATGNNATDQNPSTIINQLPLSLPGLEQKNIDIATGNNATDQNSSVVINQLPMSLPENTNQTEELQQTVVIRQLEMKSEINSCQPIIEEPTTPEPECSHVSENDIEDAFFEESDEIPTIKLDIQEFTLNLQNYMQENMELQEGEMSKALVALNQEAAHIPTTKLKNVSRLRTEHSVYELPDSHPLLEGWEKREPDDPGKYLLAIWTPGETANSIQPPERKCSAQDCGQLCNEEECFSCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHESSLNPISVPRSLIWKLDRRTVHFGTSIPSIFKGLSTQEIQQCFWRGYVCVRGFERETRAPRPLKARLHFPVSKLAKNKENTRKDSTAANSQRSNSKQNAEPQQPEFLASIPNLRQNGGS* 1798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4329 1797 PANTHER ROS1, PUTATIVE-RELATED 1 288 - -
Mal3g4329 1797 PANTHER ROS1, PUTATIVE-RELATED 288 353 - -
Mal3g4329 1797 SMART endo3end 1183 1355 IPR003265 GO:0006284
Mal3g4329 1797 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 288 353 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mal3g4329 1797 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1135 1420 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mal3g4329 1797 SMART ccc3 1356 1376 IPR003651 GO:0051539
Mal3g4329 1797 SUPERFAMILY DNA-glycosylase 747 1378 IPR011257 GO:0003824|GO:0006281
Mal3g4329 1797 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g4329 1797 Pfam RRM in Demeter 1647 1747 IPR028925 -
Mal3g4329 1797 PANTHER ROS1, PUTATIVE-RELATED 1417 1760 - -
Mal3g4329 1797 MobiDBLite consensus disorder prediction 379 412 - -
Mal3g4329 1797 Pfam Permuted single zf-CXXC unit 1613 1644 IPR028924 -
Mal3g4329 1797 MobiDBLite consensus disorder prediction 379 398 - -
Mal3g4329 1797 Gene3D Hypothetical protein; domain 2 1184 1284 - -
Mal3g4329 1797 MobiDBLite consensus disorder prediction 1752 1797 - -
Mal3g4329 1797 PANTHER ROS1, PUTATIVE-RELATED 374 1099 - -
Mal3g4329 1797 MobiDBLite consensus disorder prediction 274 305 - -
Mal3g4329 1797 MobiDBLite consensus disorder prediction 259 273 - -
Mal3g4329 1797 PANTHER ROS1, PUTATIVE-RELATED 1135 1420 - -
Mal3g4329 1797 MobiDBLite consensus disorder prediction 1069 1118 - -
Mal3g4329 1797 Coils Coil 1519 1539 - -
Mal3g4329 1797 CDD ENDO3c 1203 1321 IPR003265 GO:0006284
Mal3g4329 1797 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1417 1760 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mal3g4329 1797 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1 288 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mal3g4329 1797 MobiDBLite consensus disorder prediction 247 324 - -
Mal3g4329 1797 MobiDBLite consensus disorder prediction 1764 1797 - -
Mal3g4329 1797 Gene3D - 1285 1373 IPR023170 -
Mal3g4329 1797 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 374 1099 IPR044811 GO:0019104|GO:0035514|GO:0080111
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4329 Mal-Chr3 122683993 122693320 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4329 - - mtr:MTR_7g103680 3087.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4329 3 122683993 122693320 Mal3g4329 3 122683993 122693320 ECH
Mal3g4329 3 122683993 122693320 Mal1g3224 1 51076375 51086918 PCT