Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4324 ATGATTTTGAGAAAACGCACAGTTCTTCATCTTCTTCCCAATTCCAACCTCAACAATTCTGTTTCATTCTTCTCTTCCCAATCACCAACACTTCCTCAAGATCATCAACAATGGCTTCTAAAATTTCAACACCTTCAATCCTTAATCAACCAAGGTCACATAAAACCCGCCCAAAACACCTTCAAATCTATTCTTCTCTCCAACGTTCCTTACTCATTTCCCTCGCAAATTCACTCATTCATATCCAAACCCATCTTTCTAGAAACCCTCTTTCCCTTTTGCTCCAATCCCAACACTCTTGACAGAGTCATTGAACTCTTCTATTCCATGAAAAACGACGGTTTTATCCTCCCTAATTGTTGCATCTGCCGTATTATACAAACCCTTGTTTATTTACGCCAGTTTCAAAAGGCTGTTACTCTTTTTACCGATGTTGTTGAATCTGGTATTCGACCCTATAGGTATGCTTATGGAAAAGCTCTTCATTCTGTTGCTATGTTGAAGGATTTAAATAAGTGTTTTGAGTTGATTAATTTAATGGAAAAAGATGGGATTCCTCTTTCTGTTTATGAGTATAATTTGGTATTGGTTGGGTTGTGTAAAATGAAGAATATAAAGGATGCACGGAAGCTGTTTGATGAAATGATTCAAAGAGATCTTGTTCCTAATACGGTGAGTTTTAATACGCTTATTGATGTGTATTGTAAGGTGGGTGAAATAGAGGAAGCTTTTAGATTGAAGGCTAGGATGAAGGGTCTGTATTTGAAGGCTAATATTGTTACTTACAATTGCTTGTTAAATGGTCTTTGTAATTTGGGGAGATTGGAAGATGCTAAGAGGGTTTTGTTGGAGATGGAGAGGAATGGTTTTTTGCATAGGGGGTTTTCGAGTCTTATATTTGATGATGAGTTGGTGGGTGGAAATGAAAATGGTTTGTTAGATGGAAATGGACTGTGCGTACTTGGAATAAAGCATCTTTTTGATGATATGAAGGCAAAGGGTCTGGTTCCAAAAACTGATACATATAAAATTCTGGTTGAGGGACATTGTGACATAAAAGATTTCAATGGTGCGTATTTTTGGTATAGGGAAATGCATGATGTTGGTTTCATTTTAAATGATTACATCTGCTATCAGCTAATATCCGGGCTTAGAGAGGAGGGAATGCTTCGCGAAGCTGAAATTGTGTCCTCGGAGTTGACTAGTAGAATTCAACAACTTGAAGGCTAA 1230 0.3732 MILRKRTVLHLLPNSNLNNSVSFFSSQSPTLPQDHQQWLLKFQHLQSLINQGHIKPAQNTFKSILLSNVPYSFPSQIHSFISKPIFLETLFPFCSNPNTLDRVIELFYSMKNDGFILPNCCICRIIQTLVYLRQFQKAVTLFTDVVESGIRPYRYAYGKALHSVAMLKDLNKCFELINLMEKDGIPLSVYEYNLVLVGLCKMKNIKDARKLFDEMIQRDLVPNTVSFNTLIDVYCKVGEIEEAFRLKARMKGLYLKANIVTYNCLLNGLCNLGRLEDAKRVLLEMERNGFLHRGFSSLIFDDELVGGNENGLLDGNGLCVLGIKHLFDDMKAKGLVPKTDTYKILVEGHCDIKDFNGAYFWYREMHDVGFILNDYICYQLISGLREEGMLREAEIVSSELTSRIQQLEG* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4324 409 Pfam PPR repeat 341 370 IPR002885 -
Mal3g4324 409 SUPERFAMILY HCP-like 130 282 - -
Mal3g4324 409 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 223 257 IPR002885 -
Mal3g4324 409 PANTHER ATPASE EXPRESSION PROTEIN 3 22 307 - -
Mal3g4324 409 Pfam PPR repeat 255 286 IPR002885 -
Mal3g4324 409 Pfam PPR repeat 219 251 IPR002885 -
Mal3g4324 409 TIGRFAM PPR: pentatricopeptide repeat domain 192 224 IPR002885 -
Mal3g4324 409 TIGRFAM PPR: pentatricopeptide repeat domain 225 251 IPR002885 -
Mal3g4324 409 TIGRFAM PPR: pentatricopeptide repeat domain 341 373 IPR002885 -
Mal3g4324 409 TIGRFAM PPR: pentatricopeptide repeat domain 260 290 IPR002885 -
Mal3g4324 409 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 188 222 IPR002885 -
Mal3g4324 409 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL 22 307 - -
Mal3g4324 409 Gene3D Tetratricopeptide repeat domain 319 408 IPR011990 GO:0005515
Mal3g4324 409 PANTHER ATPASE EXPRESSION PROTEIN 3 324 401 - -
Mal3g4324 409 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 258 292 IPR002885 -
Mal3g4324 409 Gene3D Tetratricopeptide repeat domain 205 299 IPR011990 GO:0005515
Mal3g4324 409 Gene3D Tetratricopeptide repeat domain 82 204 IPR011990 GO:0005515
Mal3g4324 409 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL 324 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4324 Mal-Chr3 122617904 122619133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4324 205 403 Glycosyltransferase AT1G05670 25.714 2.07e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4324 - - gmx:100786292 301.597