Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4293 ATGGCGAGCGGTAGTAGTAGTAGAAAATCTCGAAGACGAAGAAGATCCGACGACGATTCTGCATCAGACTCCGACTCCGACCACCGCCGGAAAACTAGTCGCCGGTCACGCCGAGATTCAGATGATGATTCAACTGACAACGACGATGATAGAACTGGAAGAAAGAAAAAATCTTCCAGAACAATCACTGAAGAAGAAATTTCACAGTACATGGCTAAAAAAGCTCAGAGAAAGGCTGTGAAAGTTGCGAAAAAATTGAAGACTAATACTGTATCGGGTTATTCGAATGATTCTAATCCATTTGGTGATACTAATCTCAATGAAAAGTTTGTTTGGCGAAAGAAGATTGAGCGCGATGTTACTCAAGGTGCATCTATTGATTCCTTTTCAGTTAAGGCAGAGAAGAAAAGACAAGTAGAAAGGATGGCAGAAATTGAAAAGGTGAAAAAGAGGAGAGAAGAAAGGGCGCTTGAGAAAGCGCAACATGAAGAAGAAATGGCATTGTTAGCAAGAGAACGTGCTCGAGCCGAGTTCCAGGACTGGGAAAAAAAGGAAGAGGAGTTCCATTTTGATCAAAGCAAAGTTAGGTCAGAGATTAGATTACGTGAAGGGCGTGCCAGGCCAATCGATGTCCTAACCAAGCACCTCAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATACATGGTCTTCAAGGGTTTGACTGTTAAAGAAATGAGTGAACTTCGTGACGACATCAAAATGCACCTGGATCTTGACAGGGCAACACCAACCCATGTGGAATATTGGGAGGCTCTCCTTGTGGTGTGCGATTGGGAGCTAGCTGAATCTCGAAAAAAGGATGCAATTGATCGAGCTAGGGTGCGCGGAGAAGAACCTCCTGCTGAGCTACTTGCTGAACAAAGGGGTCTGCATTCCAGTGTTGAGCCAGATGTGAAGGACCTTTTACATGGAAAGACACGTACAGAGTTGGAAGCCTTACAGGTTCACATCGAGTCAGAGATGCGTACTGGTACAGCAAAGGTGGTTGAGTACTGGGAGGCCATTTTAAAACACCTCCACATATACAAGGCCAAGGCTTGTTTAAAGGAAATCCATGCTAAAATGTTACGTAAGCATTTGCAACGCCTTGAGCAACCATTGGAGGATGAAGATAAACCAGAACGTGCTCTTGACATGATACCTGAGGAGGCATTTACTGAGGAGGAGGAGGAGGAGGATGCTAAAGTCCGTTCTGCAGACGAATCATTTTCACCAGAGCCCATTAGAGAGAATCAAGAAGCTGAAGATGAGGCTGGATCATTTTCACCACAACTATTGCATGATGATGAAAATGAGGAAGCTATTGATCCTGAAGAGGACAAAGCTATACTGGAGCGGAAACGTATAGCTGTAATGGAAGAGCAGCAAAGACGAATTCAGGAAGCAATGGCATCAAAGCCAGCTCCATCTGAAGATAATTTAGAGTTGAAAGCCTTTAAAGCTATGGGAGCTATGGAGGATGGAGACGCAGTATTTGGATCTGGAGCTGAAGTGAGCCTCGATTCGCAGGTTTATTGGTGGCATGACAAGTACAGACCAAGGAAGCCAAAGTATTTCAACCGTGTTCACACTGGATATGAGTGGAACAAATACAACCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTGCAAGGGTACAAATTTAATATTTTCTATCCTGATCTTGTAGACAAGATAAAAGCCCCGAACTACACTATTGAGAAAGATGGCAGCAATGGGGAGACTTGCATTATTAGATTCCATGCAGGGCCACCATATGAAGATATAGCTTTCCGCATTGTAAACAAAGAATGGGAATATTCTCACAAGAAAGGTTTTAAATGCACATTTGAACGTGGAATTCTGCATGTGTACTTCAATTTCAAACGCCACCGCTACCGCCGATAA 1944 0.4347 MASGSSSRKSRRRRRSDDDSASDSDSDHRRKTSRRSRRDSDDDSTDNDDDRTGRKKKSSRTITEEEISQYMAKKAQRKAVKVAKKLKTNTVSGYSNDSNPFGDTNLNEKFVWRKKIERDVTQGASIDSFSVKAEKKRQVERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVKEMSELRDDIKMHLDLDRATPTHVEYWEALLVVCDWELAESRKKDAIDRARVRGEEPPAELLAEQRGLHSSVEPDVKDLLHGKTRTELEALQVHIESEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKMLRKHLQRLEQPLEDEDKPERALDMIPEEAFTEEEEEEDAKVRSADESFSPEPIRENQEAEDEAGSFSPQLLHDDENEEAIDPEEDKAILERKRIAVMEEQQRRIQEAMASKPAPSEDNLELKAFKAMGAMEDGDAVFGSGAEVSLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPNYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4293 647 MobiDBLite consensus disorder prediction 398 457 - -
Mal3g4293 647 MobiDBLite consensus disorder prediction 11 63 - -
Mal3g4293 647 PANTHER BNAC05G02180D PROTEIN 14 647 - -
Mal3g4293 647 MobiDBLite consensus disorder prediction 412 446 - -
Mal3g4293 647 Coils Coil 143 179 - -
Mal3g4293 647 MobiDBLite consensus disorder prediction 1 76 - -
Mal3g4293 647 Pfam Conserved mid region of cactin 171 368 IPR018816 -
Mal3g4293 647 Pfam Cactus-binding C-terminus of cactin protein 523 647 IPR019134 GO:0005515
Mal3g4293 647 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 14 647 - -
Mal3g4293 647 SMART CactinC_cactus_3 523 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4293 Mal-Chr3 122223928 122230610 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4293 K25058 - gmx:100780087 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4293 3 122223928 122230610 Mal3g4293 3 122223928 122230610 ECH