Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4289 ATGAAGCTATTGGAAAAGGATTTTGCTCTCAACCAAAGAGGAACTGTTAAATTAATTGCCGAGGAACCCGATGATGTGTGGCTCCTTTACAACCTTATCACGATCGGCGATGTTGTCACCGCCGATACCACACGTAAAGTCCATATCGAATCAAACAAAAACACCGCATCACGTGTCAAACTCACCCTTCATCTCAAAGTCACGTGTCGGGACTTTCACAAAGACTCTTCTACCCTCCGCGTCCACGGCCGCAACCTCGAAGCAAATCAACATGTTGCTGCTGGTTCTTTCCACACTTTAACCCTTGAACGAAACAAATCATTTGACCTTGAAAAAAAGTTGTGGGCTCCATACGCCGTCGAAGCCTTAGTTGATGCCACAGAGAATTCATCATCTTCTTCTTCAGATGCCAATCTCGCTGTTGTTGTTCTTCAACAACACCAAGCGGAGATTCACTTGCTTGGAAAAGGGGTCACCACTCGTTGTTCCAAAATCGAAGCGTCTTCACGTTCACATTCACACAAAAAATCATCATCTTTTTCTTCCTCTTCTAACGTGTTTTTTCGTGATGTTTTTGCGGCTTTCGTGAAGCACGTGGATTTCAAAGTTGTGAGGAGCGTTGTAATAGCAGGAGATAGCGAAGATAATACATCGCTATCCCCAACTATTTTTCGTAGGCTTCTTTTGTCAGAAGCAAGGAGATTAAAGATGAGGTCTATCGAAGAGAACAAGTCGCGTATCGTTGTTGTGGGGTCTAAATGTAATAACAACAAGAGTACTTGTGACTTTGATTTGAGGGAAATTTTAAATGACGTGGCGGTGATGAACTTGATAAAGGACAGCAATTTAGGTTTAGAAATTAGGGCTTTTAAGGAAGTGTGGGACATGGTGTGCAACAATTCGGACCGTGTGTGTTACGGACCAAAGTATGTGGAGAGTGCACACGAGATGAAGGCGATTGAGACACTTTTGATAAGTGATGAACTTTATAGGAATGAAGAGATTGAGATGAGGAAAAAATATGTGAATTTGGTGAAATCCGTGAAAGATGGTGGAGGAAAGGCTTTGGTGTATTCTTCTATGCATGTTTCGACACCACAGTTGGCTCAGCTAACTGGTGTTGCGGCCATTCTCAGATTTCCATTGCCTGGTCTTCAAGATATGGACGATGATGATCATGTTTAG 1185 0.4278 MKLLEKDFALNQRGTVKLIAEEPDDVWLLYNLITIGDVVTADTTRKVHIESNKNTASRVKLTLHLKVTCRDFHKDSSTLRVHGRNLEANQHVAAGSFHTLTLERNKSFDLEKKLWAPYAVEALVDATENSSSSSSDANLAVVVLQQHQAEIHLLGKGVTTRCSKIEASSRSHSHKKSSSFSSSSNVFFRDVFAAFVKHVDFKVVRSVVIAGDSEDNTSLSPTIFRRLLLSEARRLKMRSIEENKSRIVVVGSKCNNNKSTCDFDLREILNDVAVMNLIKDSNLGLEIRAFKEVWDMVCNNSDRVCYGPKYVESAHEMKAIETLLISDELYRNEEIEMRKKYVNLVKSVKDGGGKALVYSSMHVSTPQLAQLTGVAAILRFPLPGLQDMDDDDHV* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4289 394 Gene3D eRF1 domain 2 137 278 IPR042226 -
Mal3g4289 394 SMART eRF1_1_2 1 128 IPR005140 -
Mal3g4289 394 PANTHER EUKARYOTIC RELEASE FACTOR 1 (ERF1) FAMILY PROTEIN 1 389 - -
Mal3g4289 394 Pfam eRF1 domain 1 1 126 IPR005140 -
Mal3g4289 394 Gene3D Pelota, domain A 1 129 IPR038069 -
Mal3g4289 394 SUPERFAMILY L30e-like 286 386 IPR029064 -
Mal3g4289 394 SUPERFAMILY Translational machinery components 135 281 - -
Mal3g4289 394 PANTHER PELOTA 1 389 IPR004405 GO:0070481|GO:0070966|GO:0071025
Mal3g4289 394 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 127 IPR038069 -
Mal3g4289 394 Pfam eRF1 domain 3 286 382 IPR005142 -
Mal3g4289 394 Gene3D - 280 394 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4289 Mal-Chr3 122201420 122202604 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4289 K06965 - gmx:100803618 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4289 3 122201420 122202604 Mal3g4289 3 122201420 122202604 ECH