Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4284 ATGTCCCCTGCAATGGCACTGAATATTGATGAAAGGAGTGAGGATGGTCAAAGTGAATATCACAAAGGAGTGAAGCACTTGTATGAGAAAGGTTATCTTCACAAGGTACCAAAGAAGTATATATTCCCCTCTTCTGAAAGAGCCACAACAAGTATGGATGATTCAAATGTTGCTACGGAAAAACTTCACCTACCTATCATTGATTTTGCTGATCTTATTGGTCCAAATAGGCCACAAGCTCTTCAGTCACTAGCCAATGCTTGTGAGCAATATGGATTTTTCCAGCTAGTAAATCACAACATATCAGATGATATAACGAGGAGCATCATAGATGTTGTAGGAAGGTTCTTTGATCTTCCATTGGAGGAGAGAGCAAAGTACATGACAACTGATATGAGAGCAGCTGTGAGATATGGGACCAGCTTCAGTCAAACAAAAGACTCTGTGTTCTGTTGGAGAGATTTCTTGAAACTCATTTGTAATCCTTTGCCTGATGTTGTCTCTCATTGGCCTGCTTCCCCATTTGACTTTCAGGAAGTGGTGGCCAGCTATGCAGAAGAAACCAAACGATTGTTCATGTCAATAATGGAAGCTATCCTAGAAAGTTTAGGAATTATGGAAGCCAACCAAGAAGAGCAGGCCAAAGAAAATGACAACAATAATAATAATATTATGAAAGAATTGGACAATGGGAGCCAGATGTTAGTAACTAATTTTTACCCACCATGTCCTGAACCAGACTTAACCTTGGGAATGCACCCTCACTCTGATTATGGATTCCTCACACTTCTCCTCCAAGATGAAGTGGAGGGTTTGCAAATCCAATTTAAAGGCAAATGGCTCACTGTTCAACCTATTCCTAATGCTTTTGTTGTCAATATTGGTGATCATTTAGAGATATTTAGCAACGGAAAATACAAGAGTGTATTACATAGGGTTCTGGTGAATGAAGCTAAAAGCAGAGTATCAGTGGCTTCGCTACATAGCCTTCCTTTTGAGTGCACGGTGAGACCGTCGCCGAAACTCATTGATGAAGAGAATCCAAAGCGTTACATGGACACAGATTTTGGTAGCTTTCTTGCGTATGTGTCCACTAGAGAAACCAAGAAAAAGGATTTCCTAGAGTCCAGAAAATTAACATACACATGA 1149 0.4012 MSPAMALNIDERSEDGQSEYHKGVKHLYEKGYLHKVPKKYIFPSSERATTSMDDSNVATEKLHLPIIDFADLIGPNRPQALQSLANACEQYGFFQLVNHNISDDITRSIIDVVGRFFDLPLEERAKYMTTDMRAAVRYGTSFSQTKDSVFCWRDFLKLICNPLPDVVSHWPASPFDFQEVVASYAEETKRLFMSIMEAILESLGIMEANQEEQAKENDNNNNNIMKELDNGSQMLVTNFYPPCPEPDLTLGMHPHSDYGFLTLLLQDEVEGLQIQFKGKWLTVQPIPNAFVVNIGDHLEIFSNGKYKSVLHRVLVNEAKSRVSVASLHSLPFECTVRPSPKLIDEENPKRYMDTDFGSFLAYVSTRETKKKDFLESRKLTYT* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4284 382 Pfam 2OG-Fe(II) oxygenase superfamily 233 328 IPR044861 -
Mal3g4284 382 PRINTS Isopenicillin N synthase signature 84 101 - -
Mal3g4284 382 PRINTS Isopenicillin N synthase signature 255 276 - -
Mal3g4284 382 PRINTS Isopenicillin N synthase signature 290 316 - -
Mal3g4284 382 Gene3D - 15 362 IPR027443 -
Mal3g4284 382 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 14 379 - -
Mal3g4284 382 Pfam non-haem dioxygenase in morphine synthesis N-terminal 64 162 IPR026992 -
Mal3g4284 382 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 230 330 IPR005123 -
Mal3g4284 382 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 14 379 - -
Mal3g4284 382 SUPERFAMILY Clavaminate synthase-like 23 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4284 Mal-Chr3 122142627 122145548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4284 22 354 Glycosyltransferase AT5G59530 31.792 2.64e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4284 - - gmx:100778488 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4284 3 122142627 122145548 Mal3g4284 3 122142627 122145548 ECH
Mal3g4284 3 122142627 122145548 Mal1g3159 1 48795196 48798843 PCT