Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4257 ATGGCGGTAACTTCAACATCACTCGTTTCCCAGCTCTCCATTGGCCTCCGTCGACACTCATCCCCCAAGCTCGATTCTCTCACTTCCCAATCTCACTCCCTCTTCGATCCCAATCTTCGTTTATCAATCTCCTCCGCCAAACCCTCTCGTACCGTTATCGCCATGGCTGGCTCTGGCAAGTTCTTTGTTGGTGGCAATTGGAAGTGTAATGGAACAAAAGACTCCATCAGTAAGCTTATCTCTGACTTGAACAATGCAAAATTGGAGCCTGATGTTGATGTCGTTGTTGCGCCTCCCTTTGTGTACATCGATCAGGTGAAAAACTCAATTACAGATAGGATCGAAATATCCGGTCAGAATTCTTGGGTGGGAAAAGGTGGTGCTTTCACTGGAGAAATCAGTGTAGAACAACTAAAAGATCTTGGATGCAAGTGGGTTATTCTTGGACATTCTGAGCGAAGGCATGTTATTGGAGAAAAAGATGAGTTTATAGGAAAGAAGGCTGCCTATGCTTTGAGTGAGGGTCTTGGAGTGATTGCATGCATCGGTGAATTGTTAGAAGAAAGGGAAGCTGGGAAAACTTTTGATGTCTGTTTCCAGCAATTGAAGGCTTATGCAGATGCGGTGCCTAGTTGGGATAATATTGTTATTGCATATGAACCTGTATGGGCCATCGGGACTGGCAAAGTGGCCTCTCCCGAGCAAGCTCAGGAAGTACACATAGCTCTTCGAGATTGGCTTAAAAATAATGTCTCAGCTGAAGTCGCATCTAAAACACGAATTATTTATGGAGGATCTGTAAATGGAGGCAACAGTGCTGAGCTTGCAAAGAAAGAAGATATTGATGGATTTCTTGTTGGTGGTGCTTCATTAAAGGGGCCTGAGTTTGCCACCATTGTCAATTCAGTCACATCGAAGAAAGTCACAGCCTGA 933 0.4469 MAVTSTSLVSQLSIGLRRHSSPKLDSLTSQSHSLFDPNLRLSISSAKPSRTVIAMAGSGKFFVGGNWKCNGTKDSISKLISDLNNAKLEPDVDVVVAPPFVYIDQVKNSITDRIEISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDNIVIAYEPVWAIGTGKVASPEQAQEVHIALRDWLKNNVSAEVASKTRIIYGGSVNGGNSAELAKKEDIDGFLVGGASLKGPEFATIVNSVTSKKVTA* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4257 310 CDD TIM 61 301 IPR000652 GO:0004807
Mal3g4257 310 Hamap Triosephosphate isomerase [tpiA]. 59 302 IPR022896 GO:0004807|GO:0006096
Mal3g4257 310 ProSitePatterns Triosephosphate isomerase active site. 218 228 IPR020861 GO:0004807
Mal3g4257 310 PANTHER TRIOSEPHOSPHATE ISOMERASE, CHLOROPLASTIC 1 308 - -
Mal3g4257 310 PANTHER TRIOSEPHOSPHATE ISOMERASE 1 308 IPR000652 GO:0004807
Mal3g4257 310 Pfam Triosephosphate isomerase 62 302 IPR000652 GO:0004807
Mal3g4257 310 Gene3D Aldolase class I 42 309 IPR013785 -
Mal3g4257 310 ProSiteProfiles Triosephosphate isomerase (TIM) family profile. 60 302 IPR000652 GO:0004807
Mal3g4257 310 TIGRFAM tim: triose-phosphate isomerase 62 292 IPR000652 GO:0004807
Mal3g4257 310 SUPERFAMILY Triosephosphate isomerase (TIM) 58 303 IPR035990 GO:0004807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4257 Mal-Chr3 121846450 121849927 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4257 K01803 - gmx:100799358 538.11