Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4247 ATGGATGAAACTAAGAGAATGGAAGAAGGCCTCAAATTACAATTGGATCATGATGCTAAAGATGAGTTGAAGAAGGAAGAAACCAATAATATTGTAGATTATAATATTGATCAGCATGGCACAGACACAATGGCTAAGCCTGTGGATCAGCAAAAGACAAAGAGGGTTGCTACACTTGATGCATTTAGGGGTCTCACCATTGTGATAATGATACTGGTAGACAAAGCTGGTGGAGCTTATCCACGCATTGATCATGCCCCGTGGGATGGATGTACTTTGGCTGATTTTGTAATGCCTTTCTTTCTTTTCATTGTTGGTGTTGCCATAGCCCTTGCATTAAAGAGAATACACAAGATAAAATATGCTGTGAAGAAGATAATGCTTAGGACATTGAAGCTTCTCTTCTGGGGTATACTATTGCAAGGTGGATACTCTCATGCACCTAATGATGAGCTCTCATATGGAGTCGACATGAAATTTATTAGATGGTGTGGCATTCTCCAGAGAATAGCACTTGTATATTGTGTTGTGGCTCTAATAGAGACATTTACCACCAAGCTTAGACCCACTACCTTGAGTTCTGGACGACTTGCCATTTTTACTGCCTATAAATGGCAATGGTTTGGAGGCTTTTTGGCATTTCTCATTTACATGATCACAACTTTCACCCTCTACGTTCCTGATTGGAGTTTTGTAGATCATATTTACGGCGATGAACCAAAAAGATACACGGTGATATGTGGGACGAGAGGACACATAAGCCCTGCATGTAACGCTGTTGGATATGTTGATAGACAAGTTTGGGGGGTTAACCACTTTTATATACATCCTGTTTGGAGACACTTGAAGGAATGCACATTTAGTTCTCCAGGGGAAGGTCCAATTCGCGAAGATGCTCCAAGTTGGTGTCGTGCTCCCTTTGAACCCGAGGGCTTGTTGAGTTCAATATCAGCAATCCTCTCTGGCACCATCGGCATCCATTATGGGCATGTCTTGATTCATTTCAAGGGTCATTGGGATAGGCTCAAACAATGGGTCTCAATGGGATTTGTGTTACTCACAATAGCCATTATTCTTCATTTTACAAATGCTGTCCCTATTAATAAGCAACTCTATAGTATCAGCTATGTTTGTTTCACAGCTGGAATAGCTGGAATTGTCTTTTCTGCCCTCTACATATTGATTGATGTTTGGGGGATCCGTACTCTATTCTTGTTCTTGGAATGGATAGGAATGAATTCTATGTTAGTGTTTGTGATGGCAGCTGAGGGCATTTTTGCAGGATTTGTAAATGGATGGTATTATGAAAATCCAAATAACTCACTAGTACATTGGATTAAGAAGCATGTGTTTGTCAATGTTTGGCACTCAGAGAGAGTGGGAACTCTCTTATATGTCATCTTTGGAGAAATCACTTTTTGGGGAGTGGTAGCTGGCGTGTTGCACAAGTTAGGAATATACTGGAAACTGTAA 1473 0.4067 MDETKRMEEGLKLQLDHDAKDELKKEETNNIVDYNIDQHGTDTMAKPVDQQKTKRVATLDAFRGLTIVIMILVDKAGGAYPRIDHAPWDGCTLADFVMPFFLFIVGVAIALALKRIHKIKYAVKKIMLRTLKLLFWGILLQGGYSHAPNDELSYGVDMKFIRWCGILQRIALVYCVVALIETFTTKLRPTTLSSGRLAIFTAYKWQWFGGFLAFLIYMITTFTLYVPDWSFVDHIYGDEPKRYTVICGTRGHISPACNAVGYVDRQVWGVNHFYIHPVWRHLKECTFSSPGEGPIREDAPSWCRAPFEPEGLLSSISAILSGTIGIHYGHVLIHFKGHWDRLKQWVSMGFVLLTIAIILHFTNAVPINKQLYSISYVCFTAGIAGIVFSALYILIDVWGIRTLFLFLEWIGMNSMLVFVMAAEGIFAGFVNGWYYENPNNSLVHWIKKHVFVNVWHSERVGTLLYVIFGEITFWGVVAGVLHKLGIYWKL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4247 490 PANTHER LD22376P 9 490 - -
Mal3g4247 490 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 55 201 IPR012429 -
Mal3g4247 490 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE PROTEIN 9 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4247 Mal-Chr3 121709214 121712801 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4247 K10532 - gmx:100819967 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4247 3 121709214 121712801 Mal3g4247 3 121709214 121712801 ECH
Mal3g4247 3 121709214 121712801 Mal1g3115 1 47255917 47257260 PCT
Mal1g1698 1 22041294 22051786 Mal3g4247 3 121709214 121712801 PCT