Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4227 ATGCCTGCAACTCCATTTTCGTGTTCATTCCTAATATCGCAACCGCGCTTTAATCACTATATTAACCCTATCTTCCGTTCACTCACACACCAACTTTCTTCTTCACCGTTCCCATTCAATGTCAAATCCTCAGCCGTCAGACTCCACTGCTGTGCACTCTCCCATGCGGCGGAGACCGAATCTCCGAGCGGCGGTCGGTCTGGTGCATTATCTCCTACTCCTCCGGTCACCGGTGAAGTTCAGAAAATCGACGTGAATCCTCCCAAGGGTACACGTGATTTCCCGCCTGAAGAAATGCGATTGCGTAATTGGCTTTTTAATAATTTCAAAGAGGTGTCAAGGTTGTATGGATTTGAGGAGATTGATTTTCCGGTTCTTGAGTCGGAGGCATTGTTCACTAGGAAAGCAGGGGAGGAGATTAAGGACCAACTTTACTGTTTTGAAGATCGAGGTAATCGCCGTGTTGCATTGAGGCCTGAACTTACTCCTTCTTTGGCAAGGCTGGTGATACAGAAAGGGAAATCTGTATCACTTCCATTGAAGTGGTTCACTGTTGGACAATGTTGGCGGTATGAGAGAATGACAAGGGGGCGTCGCCGTGAGCACTACCAGTGGAATATGGATATCATTGGTGTTCCTGGGGTTATGGCTGAAGCAGAGCTTATATCTTCCATTGTTACTTTCTTCAAACGAATAGGAATTACAGAATCAGATGTTGGATTTAAGGTTTCTAGTCGAAAGGTTTTACAAGAAGTATTGAAGTGTTATTCAATACCTGAAAATATGTTTGGCAAGGTCTGCGTCATTATTGATAAAATTGAGAAAATTCCAGTTGAAGAGATAAAGAAAGAGTTGAAAGCTGTTGGTCTATCACAGGAGGCTGTCCAGGAGCTATTGCAAGTTCTTTCTGTAAAGTCATTGACCGAGTTAGAAGAGAGGCTCGGAGGCAGTGGGGAGGCAATTGCTGATCTCAAACAGCTATTCTCACTGGCTGAAAAGTTTGGTTACTCCAAATGGCTTCAACTTGATGCATCAGTTGTTCGTGGCCTTGCATATTACACTGGCATTGTCTTTGAGGGTTTTGACCGTGAAGGAAAGCTCCGAGCTATCTGTGGTGGTGGTCGATATGATCATTTGTTCTCAACTTTTGGTGCTGACGACATTCCGGCTTGTGGTTTTGGATTTGGTGATGCAGTCATAGTCGAATTGCTCAGAGAGAAGGGTCTTCTACCAGAACTCAGCTTGCAAGTACATAACATTGTTTGTGCCTTGGATGAAGAACTTCAAGGGTGTGCTGCTATGGCTGCTAACATTCTCAGAGAAAAAGGACAGAGTGTTGACTTAGTTTTGGAAAGCAAACCACTTAAATGGGTGTTTAAACGTGCAGCCAGAACAAATGCTGTGCGTCTGGTATTAGTAGGAAATTCTGAGTGGCAAAGGGGTATGGTTCGTGTCAAAATTCTCTCCACTGGTGAACAATACGAGGTTAAACTGGATGATCTAAAGTAA 1509 0.4414 MPATPFSCSFLISQPRFNHYINPIFRSLTHQLSSSPFPFNVKSSAVRLHCCALSHAAETESPSGGRSGALSPTPPVTGEVQKIDVNPPKGTRDFPPEEMRLRNWLFNNFKEVSRLYGFEEIDFPVLESEALFTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFTVGQCWRYERMTRGRRREHYQWNMDIIGVPGVMAEAELISSIVTFFKRIGITESDVGFKVSSRKVLQEVLKCYSIPENMFGKVCVIIDKIEKIPVEEIKKELKAVGLSQEAVQELLQVLSVKSLTELEERLGGSGEAIADLKQLFSLAEKFGYSKWLQLDASVVRGLAYYTGIVFEGFDREGKLRAICGGGRYDHLFSTFGADDIPACGFGFGDAVIVELLREKGLLPELSLQVHNIVCALDEELQGCAAMAANILREKGQSVDLVLESKPLKWVFKRAARTNAVRLVLVGNSEWQRGMVRVKILSTGEQYEVKLDDLK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4227 502 Gene3D Bira Bifunctional Protein; Domain 2 81 408 IPR045864 -
Mal3g4227 502 SUPERFAMILY Class II aaRS ABD-related 419 501 - -
Mal3g4227 502 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 90 411 IPR006195 -
Mal3g4227 502 SUPERFAMILY Class II aaRS and biotin synthetases 87 408 IPR045864 -
Mal3g4227 502 CDD HTH_XRE 279 337 IPR001387 -
Mal3g4227 502 Pfam Histidyl-tRNA synthetase 90 394 IPR041715 -
Mal3g4227 502 PIRSF His-tRNA_synth 81 502 IPR004516 GO:0005737
Mal3g4227 502 PANTHER HISTIDYL-TRNA SYNTHETASE 81 502 IPR004516 GO:0005737
Mal3g4227 502 Gene3D - 410 502 IPR036621 -
Mal3g4227 502 Hamap Histidine--tRNA ligase [hisS]. 83 502 IPR015807 GO:0004821|GO:0005524|GO:0006427
Mal3g4227 502 Pfam Anticodon binding domain 421 501 IPR004154 -
Mal3g4227 502 PANTHER HISTIDINE--TRNA LIGASE, MITOCHONDRIAL-RELATED 81 502 - -
Mal3g4227 502 MobiDBLite consensus disorder prediction 58 94 - -
Mal3g4227 502 TIGRFAM hisS: histidine--tRNA ligase 87 497 IPR015807 GO:0004821|GO:0005524|GO:0006427
Mal3g4227 502 CDD HisRS-like_core 98 404 IPR041715 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4227 K01892 - gmx:100793186 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4227 3 121483979 121495121 Mal3g4227 3 121483979 121495121 ECH