Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4199 ATGGATACACGCAATGGTGAGATAAGGCTTTCTAAGTTCAAAAGAATTTGTGTTTTCTGTGGTAGTAGTCCTGGCAAAAAAACTTCTTACCAAGATGCTGCCATTCAACTTGGCCAAGAATTGGTTTCAAGGAACATTGATCTTGTGTATGGAGGAGGAAGCATTGGTCTCATGGGTTTGGTTTCTCAAGCTGTTCATGATGGTGGTCGCCATGTCATTGGAGTTATTCCCAAGACACTCATGCCTAGAGAGCTAACTGGTGAAACAGTAGGAGAAGTAAAAGCTGTGGCTGATATGCATCAAAGGAAAGCTGAGATGGCTAAGCATTCAGATGCTTTTATTGCCTTACCAGGTGGATATGGAACTCTTGAGGAACTTCTTGAAGTCATAACATGGGCTCAACTTGGAATTCACGACAAGCCGGTTGGATTAGTAAATGTTGATGGATACTTTAGCTCCTTGTTGTCATTCATTGACAAAGCTGTGGAAGAAGGATTTATTAGTCCAAATGCTCGACACATAATTGTATCAGCACCAACTGCAAAAGAGTTAGTCAAGAAATTGGAGGAGTATGTTCCATGTCATGAGGGTGTTGCTTCCAAGTTGAGCTGGCAGATGGAACAGCAGCTAGCATACCCTCAAGATTATGACATCTCAAGGTAG 663 0.4208 MDTRNGEIRLSKFKRICVFCGSSPGKKTSYQDAAIQLGQELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFSSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEEYVPCHEGVASKLSWQMEQQLAYPQDYDISR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4199 220 Gene3D - 4 190 - -
Mal3g4199 220 Pfam Possible lysine decarboxylase 58 188 IPR031100 -
Mal3g4199 220 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 5 220 - -
Mal3g4199 220 SUPERFAMILY MCP/YpsA-like 12 191 - -
Mal3g4199 220 PANTHER LOG FAMILY PROTEIN YJL055W 5 220 - -
Mal3g4199 220 TIGRFAM TIGR00730: TIGR00730 family protein 14 191 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4199 Mal-Chr3 120942058 120945564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4199 K22522 - gmx:100810030 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4199 3 120942058 120945564 Mal3g4199 3 120942058 120945564 ECH