Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4179 ATGAGCGTCATCGAAATTCTAACCCGAGTCGATTCCATTTGTAAGAAATACGACAGATACGACGTCGTTAAGCAAAACGATACCAATATCTCCGGCGATGACGCATTCGCCAAACTCTACGCCGCCGTCGACACCGACATCGAGGCTGCACTTCAGAAAGCAGAAAATGCATCCAAGGAAAAAAATAGGGCTTCAACTGTAGCGATCAATGCGGAGATTCGTCGTACTAAGGCTAGGTTACTGGAAGAGATTCCCAAGTTGCAGAGGTTGGCTGTAAAAAAGGTAAAGGGGCTTTTGTCGCAAGAATTTGCTGCCCGTAATGATTTGGTTCTTTCATTGCCGGAGAGAATCCAAGCAATCCCGGATGGGACTCCTGCTGCACCCAAACAAACTGGAGGTTGGGGAGCTTCTGCTTTACGTCCTGAAATTAAATTTGATTCAGATGGCCGATTCGATGATGGATACTTTGAACCAACCAAAGAATCAAGTCAGTTTAGACAGGACTATGAAATGCGTAAACTGAAACAGGATGAAGGTTTGGATGTGATTGCAGAAGGATTAGATACTTTGAAAAACATGGCACACGATATGAACGAGGAATTTGATAGGCAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGATAAGGCGTCCTCTGACCTTAAGAATACCAATGTTAGACTTAAAGATACAGTAACCCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATCTTGGGAATCGCTGCCTATTTGTACAATGTGCTCAAATGA 795 0.4314 MSVIEILTRVDSICKKYDRYDVVKQNDTNISGDDAFAKLYAAVDTDIEAALQKAENASKEKNRASTVAINAEIRRTKARLLEEIPKLQRLAVKKVKGLLSQEFAARNDLVLSLPERIQAIPDGTPAAPKQTGGWGASALRPEIKFDSDGRFDDGYFEPTKESSQFRQDYEMRKLKQDEGLDVIAEGLDTLKNMAHDMNEEFDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVTQLRSSRNFCIDIVLLIIILGIAAYLYNVLK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4179 264 SUPERFAMILY SNARE fusion complex 163 230 - -
Mal3g4179 264 CDD SNARE_Qc 175 230 - -
Mal3g4179 264 Gene3D - 170 231 - -
Mal3g4179 264 Pfam SNARE domain 207 256 IPR000727 -
Mal3g4179 264 Coils Coil 40 67 - -
Mal3g4179 264 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Mal3g4179 264 Coils Coil 70 90 - -
Mal3g4179 264 PANTHER SYNTAXIN 1 261 IPR045242 -
Mal3g4179 264 SMART tSNARE_6 165 232 IPR000727 -
Mal3g4179 264 PANTHER SYNTAXIN-73 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4179 Mal-Chr3 120580993 120584230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4179 1 264 SNARE and Associated Proteins AT3G09740 76.692 2.31e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4179 K08506 - gmx:100819272 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4179 3 120580993 120584230 Mal3g4179 3 120580993 120584230 ECH