Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4149 ATGAGAGATTTTGTGATCCTCGGTTCATCCATCATCACTCCACCTCCCAACCCACACCCACCTTCTTCCTCCACTCCTCAACACCGCCACACCACCATCAAACCCCACAAATCCTCTCTTTCAAAGCTCTCTCCACGCAACAATTCTACTTCTACTACCCTTCTTCAAACCCCTCTCATTCTCAAAGAATTCGAAACTGTTCTTCTTGATTCTGATGTGAATGTTGAGCTCTTGGCCAATGCGGTTCTGATGGGTATACAAGATAGGAATGTTCGGACTGTGATTGACAGTTTGAATAAAGTGGAGGAGGGTCTTGCTGGGATTTCTCTGTCTACTCATCTTGATGCTTCTGCCATTGCTAATGAGTGCTCTCACATGGTTGCTTCTGGTCATATTGAAGAAGCTGTTGAATTGATGGAGGTTCTCTCACGTTTCCAGTTATCAATTGCAGAACTTGTACGGCCATCTGACATTATAAAAAGATGCATTCTTGGTCGTAAACCAACTTTAGCTGTCAGGTATGCGTCGCTTCTTCCACAAGCACATATATTATTTTGCAGCATCATATCTGAATTTGGCAAAAGGAGGGATTTGGTTTCTGCTCTAAAAGCTTACGATGCATTGAAGAAGAACTTGAAAAGTCCCAATATGTACATATACCGGGCAATAATTGACGCTTGTGGTCTCTGTGGTGGTTTCATGAAATCTAGGTACATATATGAGGATTTGCTTAATCAGAAAATCACTCCTAATATATATGTGTTCAACAGTCTCATGAACGTGAATGCCCATGATCTCAACTACTCGTTAAATCTATATCAGAATATGCAGAAACTAGGCCTGAAACCCGATATGACATCCTACAACATCCTGCTAAAAGCTTGCTGTGTTGCTGGAAGAGTTGACCTGGCCCAAGACATGTATAAGGAACTTAAGCATTTGGAATCAGTGGGACAGCTGAAATTAGATGTTTTCACCTACAGCACAATAATAAAGGTCTTTGCAGATGCAAAATTGTGGCAAATGGCTCTAAAAATCAAGCGTGACATGCTGTCTGCTGGTGTTTCTCTTAATACTGTTGCGTGGTCATCATTAATCAATGCCTGTGCACATGCGGGGCTTGTAGAGCAGGCAATTCAGTTATTTGAAGAAATGCTTTTGGCTGGCTGTGAACCCAATACACAGTGTTTCAACATCATTTTACATGCATGTGTTGAAGGTTGCCAGTATGACAGGGCTTTTCGCTTTTTCCACTCTTGGAAGGGAAATAAGATGTTAGTGTCCTTAGATGAAAGCTGCAATAGCAATTCAGAGCAGGGAGGCATGCATAATGTTACCACAGTGCCAACCGGCATTTCTAGTTCACATATCTTGAGCTTTACTGAGAGGTTCCCTTTCAGACCCACTACATCAACATACAATATTTTACTGAAGGCCTGTGGTACTAATTACTATCATGCAAAAGCGCTGATCAATGAGATGAGAACAGTAGGTCTTTCTCCGAATCAAATAAGCTGGTCAATTTTGATAAATATATGCGGCGGGTCTGAAAATGTGGAGGGTGCCATTGAGATTTTGAGAACCATGGTTGATGCTGGAATTAAACCGGATGTTATCGCATACACAACAGCCATTAAGGTTTGTGTCGAAAGTAAGAATTTTACGCAAGCATTAACATTATATGAAGAAATGAAAAGCTATGAGACGCATCCAAATTTGGTGACATATAATACACTTCTAAGGGCACGCAGTAAATACGGATCCTTACGCGAAGTGCAACAGTGCCTAACTATATATCAAGATATGCGAAAGGCAGGGTACAAACCAAATGACTACTATCTTGAGGAGCTGATTGAGGAGTGGTGTGAAGGAGTAATACAAGACAACGAAGAGTATGAAGGAGAATTTTCTTCCAGCAACAAATCTGGCAAAGAGAGACCTCATAGTTTACTTCTTGAAAAAATTGCGGCACACCTGTTAAAGAGGGTAGCTGGCATCTTGGCAATTGATGTTCAAGGGCTCACAAAGGTTGAAGCCCGCCTGGTCATTCTCGCAGTTCTTCGAATGATCAAAGAGAATTACGCTATTGGGCATTCAGTGAATGATGACATCTTGATCATCATAGGAGCTACCAAACCAGATGAAAGTCCATCTAAAGAAATATTAGTTGTGCAAGAGGCTATGATAAAACTTCTTAGAAATGAATTGGGGCTCGAGGCCCTTCCAGCCACAACCAAATTCGCACCAAGTCACACACCAAAGTTACAAAACCCCAAATTTTCAAATCTCACCATAGAAGCACTGCCAGGAGAGAATGCATTACCCACAACAATGGGGTTTCCCACAAGGAGACCTGCAGTTCTGCAAAGATTGAAGGTGATAAATCTTCAACAGATTGGGACAAAGCATGGTCAAACTTCAAGAAGCAAGGAAAAAAAACTCTCTTCTCAAATTTTTCTCCAAATAAATATGTGA 2475 0.4133 MRDFVILGSSIITPPPNPHPPSSSTPQHRHTTIKPHKSSLSKLSPRNNSTSTTLLQTPLILKEFETVLLDSDVNVELLANAVLMGIQDRNVRTVIDSLNKVEEGLAGISLSTHLDASAIANECSHMVASGHIEEAVELMEVLSRFQLSIAELVRPSDIIKRCILGRKPTLAVRYASLLPQAHILFCSIISEFGKRRDLVSALKAYDALKKNLKSPNMYIYRAIIDACGLCGGFMKSRYIYEDLLNQKITPNIYVFNSLMNVNAHDLNYSLNLYQNMQKLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGQLKLDVFTYSTIIKVFADAKLWQMALKIKRDMLSAGVSLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEGCQYDRAFRFFHSWKGNKMLVSLDESCNSNSEQGGMHNVTTVPTGISSSHILSFTERFPFRPTTSTYNILLKACGTNYYHAKALINEMRTVGLSPNQISWSILINICGGSENVEGAIEILRTMVDAGIKPDVIAYTTAIKVCVESKNFTQALTLYEEMKSYETHPNLVTYNTLLRARSKYGSLREVQQCLTIYQDMRKAGYKPNDYYLEELIEEWCEGVIQDNEEYEGEFSSSNKSGKERPHSLLLEKIAAHLLKRVAGILAIDVQGLTKVEARLVILAVLRMIKENYAIGHSVNDDILIIIGATKPDESPSKEILVVQEAMIKLLRNELGLEALPATTKFAPSHTPKLQNPKFSNLTIEALPGENALPTTMGFPTRRPAVLQRLKVINLQQIGTKHGQTSRSKEKKLSSQIFLQINM* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4149 824 Pfam Pentacotripeptide-repeat region of PRORP 191 311 IPR033443 -
Mal3g4149 824 MobiDBLite consensus disorder prediction 37 51 - -
Mal3g4149 824 PANTHER OS03G0284900 PROTEIN 29 800 - -
Mal3g4149 824 Pfam PPR repeat 325 355 IPR002885 -
Mal3g4149 824 Gene3D Tetratricopeptide repeat domain 456 650 IPR011990 GO:0005515
Mal3g4149 824 Gene3D Tetratricopeptide repeat domain 315 455 IPR011990 GO:0005515
Mal3g4149 824 Gene3D Tetratricopeptide repeat domain 183 314 IPR011990 GO:0005515
Mal3g4149 824 MobiDBLite consensus disorder prediction 9 51 - -
Mal3g4149 824 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 502 536 IPR002885 -
Mal3g4149 824 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 29 800 - -
Mal3g4149 824 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 572 609 IPR002885 -
Mal3g4149 824 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 358 392 IPR002885 -
Mal3g4149 824 Pfam PPR repeat family 358 404 IPR002885 -
Mal3g4149 824 Pfam Pentatricopeptide repeat domain 468 515 IPR002885 -
Mal3g4149 824 Pfam Pentatricopeptide repeat domain 525 582 IPR002885 -
Mal3g4149 824 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 284 314 IPR002885 -
Mal3g4149 824 TIGRFAM PPR: pentatricopeptide repeat domain 574 610 IPR002885 -
Mal3g4149 824 TIGRFAM PPR: pentatricopeptide repeat domain 504 538 IPR002885 -
Mal3g4149 824 TIGRFAM PPR: pentatricopeptide repeat domain 325 358 IPR002885 -
Mal3g4149 824 TIGRFAM PPR: pentatricopeptide repeat domain 360 394 IPR002885 -
Mal3g4149 824 TIGRFAM PPR: pentatricopeptide repeat domain 540 572 IPR002885 -
Mal3g4149 824 TIGRFAM PPR: pentatricopeptide repeat domain 287 312 IPR002885 -
Mal3g4149 824 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 537 571 IPR002885 -
Mal3g4149 824 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 323 357 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4149 Mal-Chr3 120206737 120213508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4149 187 683 Glycosyltransferase AT1G05670 20.768 3.37e-21 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4149 - - gmx:100794606 1182.93