Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4129 ATGAATGTGGTGGGAAAATTTGGAACCTTGATAACTCAGGGTGTTTATTCAGTTGCTACCCCTTTTCACCCCTTTGGTGGTGCTGTTGATGTTATTGTTGTTCAGCAACAAGATGGTACTTTTCGTAGCACACCTTGGTATGTTAGGTTTGGCAAATTTCAAGGTGTTCTTAAAGGTGCCGAGAAGATTGTTCGGATTAATGTTAATGGGGTTGAAGCGAATTTTCATATGTATCTTGATAATTCCGGGGAGGCTTATTTTGTAAAAGAGGGGGTTGATGATGATAAAAGTGTTGACTCGAATGTGGCTGTTGAAGCTGCTAACTCTGAGTTTACTTCTGAAGACGGTAGTGTGGAAATTGATACTACTGATCTTAGACTTGATCATAGTATATCTGATTCAGGGGTTCTTCAGTTGACAGGTGAAGATCAGTTGAAGATCATCGCAGAAACTGACGTTGATCGGAGATTTTATGATTTTCAAGATAATCAGCCCACAGTTGAAGGTTCAGCTGATTTGTCAGAACATGGGCATAGTCGATATGATAATCTAGACGGAGAGAATGTCGTGGACTTGCAGGGAAATCTTCCGGAGGTGATCTTGGTTAGTGTTGATGGTCATATATTGACAGCCCCTATCTCAGAATCAGAGCCAACTGAGGAAAATTTGCAGTCACAAATTCCTCAATTTCATTTGGGACCAGGTGAAGGGACTGATTTCTATGAAGGTAATGAGGAGTTTAGTTCTGGCGAAAATGCACGTGCTGCTGATTATGTTAGTCGGCCGGATGCTTCAACAGCTGATGTTCCATCCAGTATTTATAGCTCTGATATTGGTAATAGTTCTTCCCGAGTCGAGCTTGAAGCTTGCCAAAGAGAGGAGAGACCTATTTGTCACACGGAGGAAACTGGCACAGAAGAAGGTGCATCATGCATGAAGACGGAGAGTGTCTTCAAAAGTTGTTTGGACTTAAATGAACTTGCTCAGCAGGATGAAAATGACAATTTACAAGATGAAAGGTCCTCATTGATGGATCAATATTCAGCTGAGGAATCTAACGAAAATTGTTCAAATGTTGATGAAAATGCAAAGGAGAGCATCAAACAATCTAGAAATATTGGTGAGTTATCTCCCATTAGTGGGCCTACTTCTTCAGACGACAGTAATTCTCCAAATTTAAAAATAGAACTTCAAGGGGTTGATAAAGATGCATCAGTGAAAGTTGACACAAATGATGTGGAATGGAATGATAGTCATAGTCACCAAACCATTGTACTTGAAAATACTAGTGAGGAAGATAATGTAACAGCACCTCAGACAGCAACTTCCAATGAGGGGGATCAAAGTCATTTTGGTTTGAGATTTGATCTCTCACTTTGTGGCCACGAACTTAAGGCGGGTATGGGTTTTATCGCTGCTGCTGAAGTGTTTGAAGCACATCGAATATCTGCAGAGGAATTTAGAGTCTCTGCACCATCTATAACTAAGAATAAAAATCTTGTTGTGAAGTTCAGAGAGAGTTATCTACCGTGGGAAAAGGCCGCCCCTCTTGTTCTTGGAGTGGCAGCATTTGATTTAGACTTACCTGTGGACCCTGAAGATACAATTCCTGTAGGACAGGATGATAGGTTGAAGTCCAGCAATGATAATCCTGGACCATCTTCATCTGGACGTAGGTGGAGACTCTGGCCTCTTGCTTTTCGAAAAGTGAAGACAGCTGAGCACAATAGTGGTGATGAATCAAGTGAGGATATATTTCTAGATTCCGAATCTGATTTGTTTGGCTCTGTTGTCGAGACATCTCCAACCTCTGGTAGGCATGAGTCTCCCCGCAAGCAATTTGTAAGGACAAATGTTCCCTCTAATGAGATGATAGCATCATTGAATCTCAAAGATGGTCAAAATATGGTAACATTTAGTTTCTCTACAAGGGTTCTAGGAAAACAAAAGGTTGATGCTCATATATACTTATGGAAATGGAATGCAAGAATTGTAATTTCAGATGTGGATGGAACTATTACCAAATCTGATGTTTTGGGGCAGTTCATGCCTTTACTTGGAAAAGATTGGAACCAGACTGGAGTGGCAAGGCTTTTCTCTGCCATTAAGGAAAATGGATACCAGCTACTATTTTTGAGTGCCCGTGCTATTGTCCAGGCTTATATAACCAGGAACTTTTTGGTTAACCTGAAACAGGATGGAAAAACCTTACCAAAAGGACCTGTTGTTATTTCACCTGATGGATTATTTCCATCCCTTTACCGAGAAGTAATTAAAAGAGCTCCTCATGAGTTTAAGATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAACCCATTCTATGCGGGGTTTGGCAATAGAGACACAGACGAACTTAGTTACAGTAAGATAGGAATTCCAAAGGGAAAAATATTTATCATTAACCCAAAGGGTGAGGTGGCAATAAGTCATCGTATCGGTGCTAAATCTTATACATCACTACACACACTCGTCAATGACATGTTCCCACCTACGTCTTTGCTTGAACAGGAGGACTTCAACTCTTGGAATTATTGGAGAGTGCCTTACCCAGATATTGATTAG 2595 0.4058 MNVVGKFGTLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKIVRINVNGVEANFHMYLDNSGEAYFVKEGVDDDKSVDSNVAVEAANSEFTSEDGSVEIDTTDLRLDHSISDSGVLQLTGEDQLKIIAETDVDRRFYDFQDNQPTVEGSADLSEHGHSRYDNLDGENVVDLQGNLPEVILVSVDGHILTAPISESEPTEENLQSQIPQFHLGPGEGTDFYEGNEEFSSGENARAADYVSRPDASTADVPSSIYSSDIGNSSSRVELEACQREERPICHTEETGTEEGASCMKTESVFKSCLDLNELAQQDENDNLQDERSSLMDQYSAEESNENCSNVDENAKESIKQSRNIGELSPISGPTSSDDSNSPNLKIELQGVDKDASVKVDTNDVEWNDSHSHQTIVLENTSEEDNVTAPQTATSNEGDQSHFGLRFDLSLCGHELKAGMGFIAAAEVFEAHRISAEEFRVSAPSITKNKNLVVKFRESYLPWEKAAPLVLGVAAFDLDLPVDPEDTIPVGQDDRLKSSNDNPGPSSSGRRWRLWPLAFRKVKTAEHNSGDESSEDIFLDSESDLFGSVVETSPTSGRHESPRKQFVRTNVPSNEMIASLNLKDGQNMVTFSFSTRVLGKQKVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLLGKDWNQTGVARLFSAIKENGYQLLFLSARAIVQAYITRNFLVNLKQDGKTLPKGPVVISPDGLFPSLYREVIKRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYSKIGIPKGKIFIINPKGEVAISHRIGAKSYTSLHTLVNDMFPPTSLLEQEDFNSWNYWRVPYPDID* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4129 864 MobiDBLite consensus disorder prediction 332 448 - -
Mal3g4129 864 SMART lns2 664 820 IPR031315 -
Mal3g4129 864 SUPERFAMILY HAD-like 656 806 IPR036412 -
Mal3g4129 864 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 456 563 IPR031703 -
Mal3g4129 864 MobiDBLite consensus disorder prediction 340 395 - -
Mal3g4129 864 MobiDBLite consensus disorder prediction 162 182 - -
Mal3g4129 864 MobiDBLite consensus disorder prediction 417 448 - -
Mal3g4129 864 Pfam LNS2 (Lipin/Ned1/Smp2) 619 840 IPR013209 -
Mal3g4129 864 MobiDBLite consensus disorder prediction 534 558 - -
Mal3g4129 864 PANTHER LIPIN 1 864 IPR026058 -
Mal3g4129 864 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 864 - -
Mal3g4129 864 Pfam lipin, N-terminal conserved region 1 102 IPR007651 -
Mal3g4129 864 MobiDBLite consensus disorder prediction 541 555 - -
Mal3g4129 864 MobiDBLite consensus disorder prediction 400 416 - -
Mal3g4129 864 MobiDBLite consensus disorder prediction 265 280 - -
Mal3g4129 864 Coils Coil 333 353 - -
Mal3g4129 864 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4129 Mal-Chr3 120069725 120074321 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4129 K15728 - gmx:100780784 1257.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4129 3 120069725 120074321 Mal3g4129 3 120069725 120074321 ECH
Mal3g4129 3 120069725 120074321 Mal1g2959 1 42872932 42877891 PCT