Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4094 ATGAGTGAGCATGATGAAGAAGCTGTTCAAGAAGTTCAAGAAATTCACCGTCCAGTGCCCCGTTTGAATGAAAGGATTCTTTCATCTTTGTCAAGGAGATCAGTTGCTGCACACCCTTGGCATGATCTTGAAATTGGACCTGGAGCTCCCCACATTTTCAATTGTGTTGTGGAGATCACTAAAGGAAGCAAGGTCAAATATGAACTTGACAAGAAAACTGGATTGATTAAGGTTGATCGAATTTTGTATTCGTCGGTTGTTTATCCTCATAACTATGGTTTTATCCCTCGCACACTTTGTGAAGACAATGATCCAATTGATGTCCTGGTTCTCATGCAGGAGCCGGTCCTTCCTGGTTGTTTCCTGCGAGCCAGAGCCATTGGACTCATGCCAATGATTGATCAGGGAGAGAAGGATGATAAAATCATTGCAGTATGTGCTGATGATCCAGAATATAAGCACTTTACTGACTACAAAGAACTTGCACCTCATCGCATCATGGAAATTCGACGCTTTTTTGAAGACTACAAAAAGAACGAGAACAAGGAGGTGGCCGTGAATGATTTTCTACCTCCAAGCACTGCTGTTGAAGCCATCCAGCACTCAATGGATCTTTACGCGGAATACATTCTGCACACCTTGAGGCGATAG 651 0.4316 MSEHDEEAVQEVQEIHRPVPRLNERILSSLSRRSVAAHPWHDLEIGPGAPHIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPIDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHFTDYKELAPHRIMEIRRFFEDYKKNENKEVAVNDFLPPSTAVEAIQHSMDLYAEYILHTLRR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4094 216 CDD pyrophosphatase 52 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Mal3g4094 216 SUPERFAMILY Inorganic pyrophosphatase 32 212 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Mal3g4094 216 PANTHER INORGANIC PYROPHOSPHATASE 22 215 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Mal3g4094 216 Gene3D Inorganic pyrophosphatase 34 212 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Mal3g4094 216 Hamap Inorganic pyrophosphatase [ppa]. 51 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Mal3g4094 216 Pfam Inorganic pyrophosphatase 55 206 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Mal3g4094 216 ProSitePatterns Inorganic pyrophosphatase signature. 102 108 - -
Mal3g4094 216 PANTHER BNAC07G03580D PROTEIN 22 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4094 Mal-Chr3 119563178 119565314 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4094 K01507 - tcc:18613874 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4094 3 119563178 119565314 Mal3g4094 3 119563178 119565314 ECH
Mal3g4094 3 119563178 119565314 Mal1g2915 1 41732994 41735473 PCT