Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4006 ATGGATTATCTACGACGGCTATACTGTTACAGCCACGATTTGAATTTAAATAGGTTCCAAGAAATTGTACCACTAAATGCTGGAAACGTGCTTGGGTCGGAGAACAGTGGCCCAGCAGCAAAGTGGCTGGGCTTTATTCATCAAGCCCTAAATACCACCTACCATGAAAGCCCAGATCAAAAGCACCGCTTTAGCCTAGTAGCAAGCAAGCAAATGGTTGGTATCTTCTTGTGCGTGTGGGTACGCGCCGATTTCCGCAACCATGTTAGTCAATTAAAAGTGTCTCGCGTTGGCACTGGCATCATGGGCTATCTTGGAAATAAGGGTTCAATATCAATTAGCATGAGATTGTACCAAACCACCTTCTGCTTCGTTTGCACTCATTTGGCCTCTGGAGAGAAATGTGGTGACGAGTTGCGGAGAAACTTAGACATCGCGGAAATCATCAAGAGAACTAAATTTTCTCACTCACTTGGCATACTAGAACATGATAACATTATTTGGTTGGGGGATTTGAATTATCGACTTGCTGCGGGTTTCAATGATATACATGAGCTACTAAAAGAGAATAATTTGAAGGCATTACTTGAGAAAGATCAGCTAAGGATGGAACAGAAAGCTGGACGAATATTTGAAGGCTGGAATGAAGGGAGCATACACTTTGCTCCTACTTACAAATACTTGACCAATTCTGACCAATATGTTGCTCAAACTTGCAAATCCAAGGAAAAACCACGCACTCCTGCTTGGTGCGATCGAATATTATGGAAAGGGGAAGGACTAAATCAGAAAATGTATGTTCGAGGAGAGTCAAAATTCTCTGACCATAGGCCAGTGTATTCACTTTTCACAGCACAAGTGGACATGACAAACAAGAATCTCACTCGTTCTGCTTCTACTACCACTATCCCAAGATCATGTCCCATAAAACCATTCACAAATTCTGCTGCATTGCCATCTACTTGTTGTGCTGCAGCTAAAGTACAAGCAGAAGAACAACTCATGTTACTAGCGACTAGGACACAAAGTTGCATAGACACGGTTTCAAGATTCTTGTAG 1059 0.423 MDYLRRLYCYSHDLNLNRFQEIVPLNAGNVLGSENSGPAAKWLGFIHQALNTTYHESPDQKHRFSLVASKQMVGIFLCVWVRADFRNHVSQLKVSRVGTGIMGYLGNKGSISISMRLYQTTFCFVCTHLASGEKCGDELRRNLDIAEIIKRTKFSHSLGILEHDNIIWLGDLNYRLAAGFNDIHELLKENNLKALLEKDQLRMEQKAGRIFEGWNEGSIHFAPTYKYLTNSDQYVAQTCKSKEKPRTPAWCDRILWKGEGLNQKMYVRGESKFSDHRPVYSLFTAQVDMTNKNLTRSASTTTIPRSCPIKPFTNSAALPSTCCAAAKVQAEEQLMLLATRTQSCIDTVSRFL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4006 352 Coils Coil 349 352 - -
Mal3g4006 352 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 58 335 IPR045849 GO:0004445|GO:0046855
Mal3g4006 352 SUPERFAMILY DNase I-like 19 296 IPR036691 -
Mal3g4006 352 Coils Coil 184 204 - -
Mal3g4006 352 Pfam Endonuclease/Exonuclease/phosphatase family 57 276 IPR005135 GO:0003824
Mal3g4006 352 Gene3D Endonuclease/exonuclease/phosphatase 4 307 IPR036691 -
Mal3g4006 352 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 11 55 - -
Mal3g4006 352 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 58 335 - -
Mal3g4006 352 SMART i5p_5 2 291 IPR000300 GO:0016791|GO:0046856
Mal3g4006 352 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 11 55 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4006 Mal-Chr3 118540453 118542518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4006 27 333 Acyl Lipid Metabolism Gene Families AT1G65580 27.500 1.22e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4006 - - gmx:100777569 496.123