Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3976 ATGGAGGAAGCGTTAGAACTCACACGCGCGAAAGACACGAAGGAAAGAATGGCTGGTGTGGAGCGTCTCTACCATCTTCTAGAAGCTTCTAGAAAGAGTCTTTCATCTTCTGAAGTTACTTCGCTCGTTGATTCTTGCATCGATCTCTTGAAGGATAACAATTTCCGTGTCTCTCAAGGTGCACTTCAGTCTCTCGCTTCCGCCGCCGTTCTCTCCGGTGAGCATTTCAAGCTTCACTTCAACGCTCTTCTTCCCGCCGTCGTTGATCGTCTCGGTGATGCTAAACAGCCTGTTCGTGATGCTGCGCGACGACTCCTTCTTACGCTGATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGATCCTCAGCTTGGGCGCACAAAAGCTGGAGAGTCCGAGAGGAGTTTACACGAACTGTAACATCTGCGATTAATCTATTTTCATCAACCGAACTTCCACTTCAACGGGCCATCCTTCCTCCTGTTTTGCAGTTGCTGAGTGACCCAAATCTTGCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAAATGTATACACAAGCTGGACCTCAATTTCGTGATGAACTTCACCGCTACAATCTTCCTTCATCTATGGTGAAAGATATTAATGCCAGGCTAGAAGGGATTCAACCAAAAGTTCGCTCTTCAGATGGTATTCCAAGTGGTTATGGGGAAGTTAAGACTTCAAATGTTAACCCCAAGAAAAGTAGTCCAAAGGCCAAAAGTTCTTCAAGGGAGGCCTCTCTTTTTGGAGCAGAAGGTGATGTCACGGAGAAACCTGTAGATCCTATCAAGGTATACTCAGATAAGGAGTTAATCAGGGAAATTGAGAAGATTGCATCTATCCTTGTGCCTGAAAAAGACTGGTCCGTTCGTATTGCTGCTATGCAGAGAATTGAAGGTCTTGTTCTAGGAGGAGCTGCTGATTATCCATGTTTTCGTGGACTCCTGAAGCAACTTGGTGGACCTTTAAGTACACAATTATCAGACAGAAGATCTAGCATTGTAAAGCAGGCTTGCCATTTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAAGCATATGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGCTGCGCAACTGCAAAGTTGCTCGCGTGCTTCCCCGTATAGCTGATTGTGCTAAAAATGACCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGGTCCTAGAACATTGGCCAGATGCACCAGAAATACTTCGTTCAGCTGAGTTATATGAGGATATGATAAAGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGATCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCTCGTCGCCTATTGTCATCCTTTGACCCTGTTATTCAACGGTTAATAAATGAAGAGGATGGAGGAATACACAGGCGACATGCTTCACCTTCCATTCGTGATAGAGGTGCACTGACGTCATTACCCAGTCAAGCCTCTGCTTCGTCTAATCTACCTGGTTATGGAACATCTGCAATTGTTGCAATGGATAGAAGTTCAAGTTTATCATCAGGGACATCTGTCTCCTCTGGTTTACATCTTTCACAGGCAAAGTCACTTGGTAAGGGTACAGAACGTAGTTTGGAAAGTGTATTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGCTTGAATATGTCTGATAAGCATAATGCATCGTCTCTCCGGTCATCAAGTTTGGATCTAGAAGTTGACCCTCCATCGTCTCGTGATCCGCCTTTCCCAGCTGCTGTCTCTGCATCCAATCATTTGACAAGCTCTTCAACAACAGAACCTACTGCTTATGGTGTCTATAAAGGTCATAACCGAAATGGTGGTCTGGGTTTGTCTGACATAATCACTCAAATTCAAGCTACCAAAGATTCTGCCAAGTCATCATATCATAGTAATGTTGAAACTGAGCCTTTACCATCATTATCCTCATATTCAACTAGAAGAGCTTCTGAAAGATTACAAGAAAGGAGTTCTGTTGATGACAATAGTGACATCAGGGAGGCTAGGCGATTTATAAACCACAACAGTGATAAGCAGTATTTGGATGCCCCTTATAGAGAAGGAAACTTTAGGGAATCACATAATAGTTATGTGCCTAATTTTCAGAGGCCACTAGTGAGAAAGAATGCAACTGGACGTATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAACCAGCTATCTCTTGGAGAGATGTCAAGTTATGCAGATGGACCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTTAGGTCAGGTTCTGACTGGTCTTCTAGGGTTGCTGCCTTTAACTATCTGCACTCGTTGTTGCAGCAAGGTCCAAAGGGAACTCTAGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCTCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTAGCAGATATAGTTCCAGCATGTCGAAAGCCTTTTGAGGGTTACATGGAAAGAATATTACCACACGTCTTTTCTCGGTTAATTGATCCTAAAGAGGTTGTTAGGCAGCCATGTTCAACAACATTGGAAGTTGTTGGTAAAACTTACAGTGTCGATTCTCTCTTACCTGCACTGTTACGTTCACTAGATGAACAAAGGTCTCCAAAGGCTAAATTGGCCGTGATTGAATTCGCAATCAATTCCTTTAACAAACATGCAATGAATGCAGAAGGTGCTGCTAATATTGGCATACTAAAATTGTGGCTTGCTAAGTTAACCCCTTTGGTTCATGACAAGAATATGAAGCTTAAAGAAGCAGCTATTACTTGCATTATTTCAGTGTATAATCACTTTGATTCAACTGCAGTTCTTAATTTCATTCTGAGTTTGTCAGTGGAAGAACAAAATTCTTTGAGACGAGCCCTTAAACAGTACACCCCTCGCATTGAAGTAGACCTAGTAAACTATCTGCAGAACAAGAAAGAGCGACAACGTTCCAAGTCTTCCTATGACCCATCTGATGTTGTAGGAACGTCATCTGAAGATGGGTATGTTGGTTTCTCTAGGAAAGCTCATTACCTTGGAAGATATTCGGTTGGTTCCCTAGATAGTGATGGTGGTAGGAAGTGGAGCTCTCAGGATTCAACTCTTTTGAAATCCAGTCTTGGTCCAGCAGCTTCTGTTGAAAGTGATGATCATAATCATAATCATAATCATAATCTTGAGACTGATTCTAATTGTGACAGTCTTGGTTCAAAACCCAAAGATCTTGCATATTCAGTCAATCCAATGGGTCAAAATTTTGGCTCTCAATCTAGCCAGCTTGGACATGTGGACAGTAGCATGAATTTCGAGGGTATTTCAACTCCTCGTCTAGATGTTAATGATCTGATGTCATTAGAGCGTTCAAATGTTGGGGAAGGCTATGCAAATGACAAAGAACTGCCTTCTGCATTGGAACTTAATCACCACTCAACCGAAGCTGTAAAGATCAACTCCACGGCAGACACTGGGCCCAGCATTCCTCAAATTCTTCATATGATATGCAATGCAAATGACGGTAGCCCTGTTTCAAGTAAACAGACCGCACTTCAACAGTTATTTGAAGCTTCTACAACAAATGATCAGTCTGTTTGGACCAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCGGATTCCTCAGTCAGAGAGCTTGCTCTTTCACTGATAGTTGAAATGCTCAAAAACCAGAAAGATGCCCTGGAGAATTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACGAAAGATATTGTTCCTAAGGTTTCAAATGAAGCAGAGCACTGCCTGACCGTTGTTTTATCTCAGTCCGATCCATTCAGATGTTTAAGCGTAATTGTCCCTCTACTGGTTACTGAGGATGAGAAAACGCTTGTCACTTGCATTAATTGCTTAACAAAGCTTGTGGGCAGGCTCTCTCAGGAGGAACTGATGGCTCAGTTACCCTCGTTTCTGCCTTCTCTTTTTGAAGCTTTTGGAAACCAGAGTGCAGATGTTCGCAAGACCGTTGTTTTCTGTCTCGTGGATATTTATATCATGCTTGGGAAAGCATTTTTGCCATATTTGCAAGGCCTTAACAGCACACAGTTGAAGCTGGTTACCATTTATGCGAATCGAATCTCACAAGCCAGGACAGGTAAAGCAATTGATACCGTTCATGATTAG 4344 0.4252 MEEALELTRAKDTKERMAGVERLYHLLEASRKSLSSSEVTSLVDSCIDLLKDNNFRVSQGALQSLASAAVLSGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSSAWAHKSWRVREEFTRTVTSAINLFSSTELPLQRAILPPVLQLLSDPNLAVREAAILCIEEMYTQAGPQFRDELHRYNLPSSMVKDINARLEGIQPKVRSSDGIPSGYGEVKTSNVNPKKSSPKAKSSSREASLFGAEGDVTEKPVDPIKVYSDKELIREIEKIASILVPEKDWSVRIAAMQRIEGLVLGGAADYPCFRGLLKQLGGPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFEAYAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEILRSAELYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLLSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALTSLPSQASASSNLPGYGTSAIVAMDRSSSLSSGTSVSSGLHLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLNMSDKHNASSLRSSSLDLEVDPPSSRDPPFPAAVSASNHLTSSSTTEPTAYGVYKGHNRNGGLGLSDIITQIQATKDSAKSSYHSNVETEPLPSLSSYSTRRASERLQERSSVDDNSDIREARRFINHNSDKQYLDAPYREGNFRESHNSYVPNFQRPLVRKNATGRMSAGRRRSFDDNQLSLGEMSSYADGPASLHEALSEGLRSGSDWSSRVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKEVVRQPCSTTLEVVGKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNAEGAANIGILKLWLAKLTPLVHDKNMKLKEAAITCIISVYNHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLVNYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGFSRKAHYLGRYSVGSLDSDGGRKWSSQDSTLLKSSLGPAASVESDDHNHNHNHNLETDSNCDSLGSKPKDLAYSVNPMGQNFGSQSSQLGHVDSSMNFEGISTPRLDVNDLMSLERSNVGEGYANDKELPSALELNHHSTEAVKINSTADTGPSIPQILHMICNANDGSPVSSKQTALQQLFEASTTNDQSVWTKYFNQILTVVLEVLDDSDSSVRELALSLIVEMLKNQKDALENSVEIVIEKLLHVTKDIVPKVSNEAEHCLTVVLSQSDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPSLFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDTVHD* 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3976 1447 MobiDBLite consensus disorder prediction 518 534 - -
Mal3g3976 1447 Gene3D - 1221 1439 IPR011989 -
Mal3g3976 1447 Gene3D - 1 221 IPR011989 -
Mal3g3976 1447 MobiDBLite consensus disorder prediction 675 715 - -
Mal3g3976 1447 PANTHER PROTEIN, PUTATIVE-RELATED 28 1439 - -
Mal3g3976 1447 Pfam CLASP N terminal 282 498 IPR024395 -
Mal3g3976 1447 Pfam CLASP N terminal 801 995 IPR024395 -
Mal3g3976 1447 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Mal3g3976 1447 Gene3D - 264 504 IPR011989 -
Mal3g3976 1447 SUPERFAMILY ARM repeat 7 400 IPR016024 -
Mal3g3976 1447 MobiDBLite consensus disorder prediction 221 260 - -
Mal3g3976 1447 SUPERFAMILY ARM repeat 288 1437 IPR016024 -
Mal3g3976 1447 Coils Coil 1283 1303 - -
Mal3g3976 1447 MobiDBLite consensus disorder prediction 675 699 - -
Mal3g3976 1447 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Mal3g3976 1447 MobiDBLite consensus disorder prediction 1094 1150 - -
Mal3g3976 1447 MobiDBLite consensus disorder prediction 632 646 - -
Mal3g3976 1447 MobiDBLite consensus disorder prediction 231 253 - -
Mal3g3976 1447 PANTHER CLASP 28 1439 - -
Mal3g3976 1447 MobiDBLite consensus disorder prediction 602 617 - -
Mal3g3976 1447 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Mal3g3976 1447 MobiDBLite consensus disorder prediction 602 646 - -
Mal3g3976 1447 MobiDBLite consensus disorder prediction 505 534 - -
Mal3g3976 1447 Gene3D - 797 1019 IPR011989 -
Mal3g3976 1447 SMART TOG_3 1203 1439 IPR034085 -
Mal3g3976 1447 SMART TOG_3 280 512 IPR034085 -
Mal3g3976 1447 SMART TOG_3 782 1028 IPR034085 -
Mal3g3976 1447 SMART TOG_3 3 224 IPR034085 -
Mal3g3976 1447 MobiDBLite consensus disorder prediction 1136 1150 - -
Mal3g3976 1447 MobiDBLite consensus disorder prediction 700 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3976 Mal-Chr3 118130997 118147863 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3976 K16578 - gmx:100796697 2459.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3976 3 118130997 118147863 Mal3g3976 3 118130997 118147863 ECH
Mal3g3976 3 118130997 118147863 Mal1g2612 1 36221607 36244995 PCT