Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3954 ATGGATGCAAAAGAAGAAGGAGAATCTAATGAGGAAAGACCCACATCTCCAATGTGGGTCCTACACCAGATATCTGAGGGAGCAATTAGAGTTGCTGGGGAAGCATTGCATAATATGTATTCTGGTAGTGGTGGATCAAGCTTGCCACAAATAGGGCCTAGTACTGTTGCACATAGGAGAACTCAAAGTGAAATTGTTACTAAAGGATTTCAACGTAGTAATAGTTTTCAGAAGTTAAAAATTCATGTGCAAAAGGCATGGGGTTGGGGAAGAAAAAGGGAAGAAGGTTTCGCGGCGAATTTCAATCCTGAGGTCATGGCAAACCAGAAACGTCAGTGGTATCAGCTTCATCCCAAAACTATGGATTGTATAAATTATATGGAGCCAACCTCGCTCTTTGAACATTTTGTGATAGTGGGGCTACATCCAGATACTAATTTGGAAGCCGTGGAGCATGCATTTGCAAGAAGGAAGAAATGGGAAAGAGAGAAGCAAATGTCTGAAATTCTAAATTACAAAATGATGCAGCAACAAAAGCCGCCAGAACCAACATTGGAACCTCAGATATTGTTCAAATATCCTCCTGCGCGGAGGTTAACAGTGCGTTTGAAGGATTTAGCCTCCTTTTGCTTTCCTCAAGGTGTTAAGGCGTCGATGTTGGAGAGGACTCCATCTCTAAGTGCACTAAACGAACTTGTCTACGGACAGGAGCATTTAGGAAGAGATGATCTATCATTTGTCTTTACACTCAAGGCATCAGACAATTCACCACTTTATGGAGTTTGTTTACATGTGCCTGAATTTGTTCAGAGGCCCCCTGGTATCTTAGGCACATCATCTCCTATTTCTATTCCCTCTGGGCTAGGCAGCCGCTTTCTGGTTTCTGCACCTCGTTGTTATTGTCTTCTGACCAAAGTTCCTTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTGATTGCACAGGAGCGTCTGAACCGGATTACTCAGTTTGTAAATGAGATTAATCTTTCTAGTTGCCTTCCATCAACACCGAAATTAGATGATCAATTGAGTTCATATACTAGCTCCCCGGAGAGGGAATCGTTTAGTGACTGGAAGGCTTGTGCAATACCTCTCGATGGTGCAGCAGTCATTACTGCTGCTGCTGCTGGAATTATATCTGATGATGAAATCCCACAATTATCACCCAAAATATGGGATTCTCGCTGTCAATCCCCTGTAAGTGTGACTGCAAGTGATGCTTCAGATTTTTGTCAGTTTAGGGATATAGAGAAGGAAGGCAAGAAGAATCTACAAGATCATGATACATTTGCTTTCGAGGGACCAGAAACTCATGATTCGGTGGAAAGAATGGATAAAGAGAAGGAAGGCAAGAAGAATCTACAAGATCATGATACATTTGCTTTCGAGGGACCAGAATCTCATGATTCGGTGGAAAGAATGCATGGAAATTGTGAAGGTGGCCAAATTTCTCCCAGTGTTAGATCACATGTATCTGCTCGGGGCCGTTTGGAACGTCTTGGAAGTTCTGAGTCATTTTTCAGTCCAGCTAGAAGCATTGTGTCGGAAGATGAGGATCATCAGTTTTCAAACAACGAAAGAGATTACGGAGATGATTTGTTCATGGAATGGGCTACGGAGCATAAGAATGATTTACTACAGATAGTGTGCAGATATCATGCCCAAGCTATTCCCCCTCGAGGAAGTGAATTTGTCTTCCACCCTCTTGAACACTTACAAGCTATTCAATATATACGACATTCACTTGCTTCTCTTGGCTTCAAAGAAAATTGTTTAGATTGTTCTGAACCAACTGAGGTCAATGCGAAGTTGGCCGCTGCTGAGGAAGCCCTTTCATTAGCAGTATGGACAACATCAACTACTTGCCGAGTTCTGTCCCTTGATAATCTACTGGCATTAGTTACAGGAGTGTTATTGGAAAAACAAGTTGTAATAGTGTGCCCAAATTTGGGTGTTCTATCTGCAGTAGTGCTTTCTCTTATACCGATCATTCGTCCATTTCAGTGGCAGAGTTTACTGCTACCGGTTTTGCCTGCAAAAATGGTTGATTTTCTCGACGCCCCAGTTCCGTATATCGTTGGCATACAACATAAACCAGATGATATGTATATGAAAACTGCTAATCTTGTTCAAGTTGATGTAATGAAAGATCAGGTTAAAATGTGTCACTTGCCTAGACTTCCAAAGCAAAGAGAGCTTGTTTCTCAGTTGAGTCCAATTCATGCCAGACTTTCTAATGAAAGTTCAATTGCTAGAAAGCATCCTATACATAGGTGCAACGAAGTCCAGGCTGAAGCTGCAACTCGATTTTTGAATATCATCTGGAACTATTTGGAGTCACTTTGTTCAGATTTGAAATCGCATACGATAACTAGTGTGCAATCGAATAGTGACAGGGTTTCTTTACTTCTTAAAGATAGCTTCATTGACTCCTTTCCTCTTAGGGACCAGCCATTCATTAAGCTATTTGTAGATACCCAGCTATTCACTGTTTTATCAGACTCTTGCTTATCAAGCTTTGAGAGCGGCAAATTGTAG 2562 0.4149 MDAKEEGESNEERPTSPMWVLHQISEGAIRVAGEALHNMYSGSGGSSLPQIGPSTVAHRRTQSEIVTKGFQRSNSFQKLKIHVQKAWGWGRKREEGFAANFNPEVMANQKRQWYQLHPKTMDCINYMEPTSLFEHFVIVGLHPDTNLEAVEHAFARRKKWEREKQMSEILNYKMMQQQKPPEPTLEPQILFKYPPARRLTVRLKDLASFCFPQGVKASMLERTPSLSALNELVYGQEHLGRDDLSFVFTLKASDNSPLYGVCLHVPEFVQRPPGILGTSSPISIPSGLGSRFLVSAPRCYCLLTKVPFFELHFEMLNSLIAQERLNRITQFVNEINLSSCLPSTPKLDDQLSSYTSSPERESFSDWKACAIPLDGAAVITAAAAGIISDDEIPQLSPKIWDSRCQSPVSVTASDASDFCQFRDIEKEGKKNLQDHDTFAFEGPETHDSVERMDKEKEGKKNLQDHDTFAFEGPESHDSVERMHGNCEGGQISPSVRSHVSARGRLERLGSSESFFSPARSIVSEDEDHQFSNNERDYGDDLFMEWATEHKNDLLQIVCRYHAQAIPPRGSEFVFHPLEHLQAIQYIRHSLASLGFKENCLDCSEPTEVNAKLAAAEEALSLAVWTTSTTCRVLSLDNLLALVTGVLLEKQVVIVCPNLGVLSAVVLSLIPIIRPFQWQSLLLPVLPAKMVDFLDAPVPYIVGIQHKPDDMYMKTANLVQVDVMKDQVKMCHLPRLPKQRELVSQLSPIHARLSNESSIARKHPIHRCNEVQAEAATRFLNIIWNYLESLCSDLKSHTITSVQSNSDRVSLLLKDSFIDSFPLRDQPFIKLFVDTQLFTVLSDSCLSSFESGKL* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3954 853 Pfam DENN (AEX-3) domain 628 723 IPR001194 -
Mal3g3954 853 ProSiteProfiles Tripartite DENN domain profile. 436 851 IPR037516 -
Mal3g3954 853 SMART DENN_cls 295 725 IPR001194 -
Mal3g3954 853 Gene3D - 120 344 - -
Mal3g3954 853 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 25 452 - -
Mal3g3954 853 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 453 852 - -
Mal3g3954 853 Gene3D - 623 787 IPR043153 -
Mal3g3954 853 Pfam uDENN domain 187 265 IPR005113 -
Mal3g3954 853 SMART uDENN_cls 129 266 IPR005113 -
Mal3g3954 853 PANTHER BNAA09G10210D PROTEIN 25 452 - -
Mal3g3954 853 PANTHER BNAA09G10210D PROTEIN 453 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3954 Mal-Chr3 117778156 117785346 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3954 - - gmx:100814487 1279.23