Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3928 ATGGAGGGTGGAGGTAGTTTCAGGATTAGTAGTTCATCAATTTGGAGGAACAATGATACTGCTGAGATTTTTTCTAATTCTTTCCACCAAGAAGATGATGAAGAAGCTCTTAAATGGGCTGCAATTCAGAAACTTCCTACTTTTGCACGTTTGAGGAAAGGTTTGCTCACTTCACTTCAAGGGGGAGCCATCGAGATCGATATAGAGAGCCTTGGATTGCAAGAAAGAAGAGATTTGCTTGAAAGACTTGTTAGACTTGCTGAAGAGGACAATGAGAAGTTTCTGCTCAAACTTAAGGATCGAATGGACAGAGTTGGAATTGATCTTCCTACAATAGAAGTTCGATTCGAGCGCCTGAATATCGAAGCAGAGGCTCATGTAGGAAGCAGATCTTTGCCTACCTTCACTAACTTCATGGTTAATATAGTGGAGGGCCTATTGAACTCTCTTCATGTACTTCCAAGTAGAAAACAACATCTAAATATTCTCAAGGATGTTAGTGGAATAATAAAGCCTTCCAGATTGACATTACTTTTGGGACCTCCAAGTTCTGGAAAAACCACACTCTTGTTGGCCTTGGCTGGAAAACTTGACCCAAAATTGAAGTTTTCTGGAAAGGTGACTTATAATGGTCATGAGATGAGTGAGTTTGTGCCCCAAAGAACTGCTGCTTATGTGGATCAAAATGATCTTCACATCGGAGAAATGACTGTTAGAGAAACCTTGGCCTTCTCAGCAAGGGTTCAAGGAGTTGGGCCGCATTATGACTTACTAGCAGAATTGTCCAGAAGAGAAAAACATGCAAATATCATGCCTGATCCAGATATTGATGTGTACATGAAGGCTGTAGCAACTGAAGGCCAGAAGGCAAGTTTGATAACAGATTATGTCCTAAGGGTTTTGGGACTAGAGATATGTGCTGATACTATTGTAGGAAATCCAATGTTAAGAGGTATCTCTGGTGGACAAAAGAAACGCCTTACAACAGGGGAGATGTTGGTCGGACCCACTAAAGCTCTATTCATGGACGAAATATCTACTGGTTTGGATAGCTCAACAACTTTTCAAATTGTGAATTCAATGAAGCAAGATGTCCACATTCTCAAAGGAACCGCCATTATCTCACTCCTGCAGCCACCACCAGAGACTTACAATCTTTTTGACGATGTTATTCTACTCTCTGATAGTCGCATTATATACCAAGGTCCACGGGAACACGTGCTTGAATTTTTCGAATCAATCGGTTTTAAATGTCCTAATAGGAAAGGAGTGGCAGATTTCTTGCAAGAAGTCACATCAAGGAAAGATCAAGAGCAGTACTGGGAACACAAAGATCAGCCATATAGATTTGTCACAGCTGAAGAGTTTTCCGAGGCATTTCAATCATTTCATGTTGGTAGAAGACTTGGTGATGAACTTGGTACTGAATTTGACAAGTCTAAGAGCCATCCAGCTGCTTTGACAACCAAGAAATATGGAGTTGGGAAATGGGAACTGTATAAAGCTTGCTCATCAAGAGAATATTTACTTATGAAGCGCAATTCATTTGTCTACATTTTCAAACTTTGCCAACTAGCTATAATGGCCATGATTGCCATGACCCTCTTCCTCCGGACTGAAATGCACAGAGATTCAGTGAGTCATGGAGGTATATATGCAGGTGCATTGTTCTTTGGCGTTGTTGTGATCATGTTCAATGGAATGGCTGAACTTTCCATGGTAGTTTCAAGACTTCCTGTTTTCTACAAGCAAAGAGGATACCTGTTTTTCCCTGCATGGGCATATGCTCTTCCTGCATGGATCCTTAAAATTCCTTTGATTTTTGTGGAAGTGGCTGTTTGGGTATTCCTTACCTACTATGTCATTGGTTTTGATCCATATATTGAAAGATTTTTCAGACAATACCTTATTCTTGTACTAGTACACCAGATGGCTTCTTCATTATTCAGATTCATTGCAGCAGTTGGGAGGGACATGACAGTAGCTCTAACATTTGGATCATTTGCAATTGCCATCCTTTTTGCTATGAGTGGTTTTGTCCTATCAAAAGACAGTATTAAAAGAGGGTGGTTATGGGGATTCTGGTTTTCACCTATGATGTATGGACAAAATGCTATGGTAAATAATGAGTTCCTTGGGAATAAATGGAAACATGTTCTTCCTAACTCAACTGAGCCGCTAGGAGTTGAAGTTTTAAAATCTCGTGGATTCTTCACCGAGTCATATTGGTACTGGATAGGTGTTGGTGCTTTGTTTGGATATACATTACTTTTCAATTTTGGCTATATCCTTGCCCTCACTTTCTTGAATCCTCTTGGGAAGCATCGAACTGTTATACCAGATGAATCTCAAAGCAATGGGCAAATTGGTGATAGCTTCTCACAGATCACAAATAAAGTTAGAAACGGTGAAAGTAGAAGTGGAAGCATCTCTCGCAGTACTTTATCCAGTAGACAAGAAATAGTTGCTGCGGAAACAAATCATAGTAGGAAAAGGGGAATGATTCTTCCTTTTGAACCATATTCTATAACCTTTGACGAAGTTACATATTCTGTAGACATGCCACAGGAAATGCGACGAAACCTAGGTGTTGTTGAGGATAAGTTGGTTCTTTTAAAGGGTGTAAGTGGAGCTTTCAGACCTGGTGTTCTCACTGCTCTGATGGGTGTCACTGGTGCTGGCAAAACAACTCTGTTGGATGTGCTTTCTGGTAGGAAAACCGGTGGATATATTGGTGGGAACATCACAATTTCTGGCTTTCCAAAGAAGCAAGAAACCTTTGCAAGAATTTCTGGATACTGTGAGCAAAATGATATCCACTCTCCTTATGTTACTGTCTATGAATCTTTGCTATATTCAGCGTGGCTCCGATTATCCCCGGACATCAATGCTGAAACCAGAAAGATGTTCGTTGAGGAAGTCATGGAACTTGTGGAACTGAAACCACTGCAAAACGCATTAGTAGGATTGCCTGGTGTTAATGGTCTCTCGACGGAGCAGCGCAAACGGTTGACAATTGCAGTTGAGTTGGTAGCTAACCCTTCTATAATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCTGCAGCTATTGTAATGAGAACAGTTAGGAACACAGTAGACACTGGAAGAACAGTTGTTTGTACCATCCACCAGCCTAGCATTGATATATTTGAATCTTTTGATGAGCTTTTGCTACTTAAGCAAGGAGGACAAGAGATATATGTGGGGCCACTTGGACATGATTCTTCCAATTTAATCAATTACTTTGAGGGAATCCAAGGTGTTAGCAAGATTAAAGACGGTTATAATCCTGCAACATGGATGTTGGAAGTCACAACTTCATCTAAAGAAGTGGAATTGGGGATTGATTTTGCAGAGGTGTACCAAAATTCAGAGTTATACAGGAGAAATAAATCACTTATCAAAGAATTGAGTACTCCAGCTCCTGGTTCGAAAGACCTTTATTTTCCTTCGCAGTATTCAAGATCCTTTTCAACACAGTGCATGGCTTGCTTATGGAAACAACATTGGTCTTATTGGCGCAATCCTGAATATAATGCCATAAGATTTTTGTACTCAACCGCAGTGGCTGTTTTGTTTGGAAGCATGTTTTGGGACCTTGGCTCCAAAATTGAAAAGGAGCAAGATCTTTTTAATGCCATGGGGTCCATGTATTCCGCTGTTATCGTAATTGGCATCAAGAATGCTAATTCAGTGCAGCCAGTGGTTGCTGTCGAAAGAATGGTCTTTTATAGAGAAAGAGCAGCCGGAATGTATTCAGCTTTCCCATATGCTTTTGCTCAGGTTGTAATTGAGCTCCCATATGTTCTTGTACAATCTGTGGTCTATGGTCTTATAGTGTATGCTATGATTGGTTTTGAGTGGACTGTGGTTAAACTTTTGTGGTGCCTATTCTTCTTGTTTTTTACCTTCCTCTACTTCACCTACTATGGGATGATGTCGGTGGCCATGACTCCAAACAATCATATTTCCATTATAGTTTCCTCGGCATTCTATTCAATATGGAATCTCTTCTCAGGATTCATAGTCCCAAGACCAAGTATTCCAGTGTGGTGGAGGTGGTACAGTTGGGCAAATCCAATAGCTTGGAGTTTGTATGGATTGGTGGTTTCGCAATATGGAGATGTAAAACACATCATTGAATCTAGTGATGGAAGACAAACAGTTGAAGGTTTTCTGAAAAATTACTTTGGTTTCAAACATGATTTTCTAGGAGTGGTTGCAGTTGTTAATGTTGCATTTCCAATAGGTTTTGCTTTGGTCTTTGCCATATCAATTAAGATGTTTAATTTCCAAAGGCGTTAA 4335 0.4028 MEGGGSFRISSSSIWRNNDTAEIFSNSFHQEDDEEALKWAAIQKLPTFARLRKGLLTSLQGGAIEIDIESLGLQERRDLLERLVRLAEEDNEKFLLKLKDRMDRVGIDLPTIEVRFERLNIEAEAHVGSRSLPTFTNFMVNIVEGLLNSLHVLPSRKQHLNILKDVSGIIKPSRLTLLLGPPSSGKTTLLLALAGKLDPKLKFSGKVTYNGHEMSEFVPQRTAAYVDQNDLHIGEMTVRETLAFSARVQGVGPHYDLLAELSRREKHANIMPDPDIDVYMKAVATEGQKASLITDYVLRVLGLEICADTIVGNPMLRGISGGQKKRLTTGEMLVGPTKALFMDEISTGLDSSTTFQIVNSMKQDVHILKGTAIISLLQPPPETYNLFDDVILLSDSRIIYQGPREHVLEFFESIGFKCPNRKGVADFLQEVTSRKDQEQYWEHKDQPYRFVTAEEFSEAFQSFHVGRRLGDELGTEFDKSKSHPAALTTKKYGVGKWELYKACSSREYLLMKRNSFVYIFKLCQLAIMAMIAMTLFLRTEMHRDSVSHGGIYAGALFFGVVVIMFNGMAELSMVVSRLPVFYKQRGYLFFPAWAYALPAWILKIPLIFVEVAVWVFLTYYVIGFDPYIERFFRQYLILVLVHQMASSLFRFIAAVGRDMTVALTFGSFAIAILFAMSGFVLSKDSIKRGWLWGFWFSPMMYGQNAMVNNEFLGNKWKHVLPNSTEPLGVEVLKSRGFFTESYWYWIGVGALFGYTLLFNFGYILALTFLNPLGKHRTVIPDESQSNGQIGDSFSQITNKVRNGESRSGSISRSTLSSRQEIVAAETNHSRKRGMILPFEPYSITFDEVTYSVDMPQEMRRNLGVVEDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLLDVLSGRKTGGYIGGNITISGFPKKQETFARISGYCEQNDIHSPYVTVYESLLYSAWLRLSPDINAETRKMFVEEVMELVELKPLQNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPLGHDSSNLINYFEGIQGVSKIKDGYNPATWMLEVTTSSKEVELGIDFAEVYQNSELYRRNKSLIKELSTPAPGSKDLYFPSQYSRSFSTQCMACLWKQHWSYWRNPEYNAIRFLYSTAVAVLFGSMFWDLGSKIEKEQDLFNAMGSMYSAVIVIGIKNANSVQPVVAVERMVFYRERAAGMYSAFPYAFAQVVIELPYVLVQSVVYGLIVYAMIGFEWTVVKLLWCLFFLFFTFLYFTYYGMMSVAMTPNNHISIIVSSAFYSIWNLFSGFIVPRPSIPVWWRWYSWANPIAWSLYGLVVSQYGDVKHIIESSDGRQTVEGFLKNYFGFKHDFLGVVAVVNVAFPIGFALVFAISIKMFNFQRR* 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3928 1444 CDD ABCG_PDR_domain1 154 402 IPR034001 -
Mal3g3928 1444 Pfam ABC-2 type transporter 378 457 IPR043926 GO:0140359
Mal3g3928 1444 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1444 - -
Mal3g3928 1444 Pfam ABC transporter 163 345 IPR003439 GO:0005524
Mal3g3928 1444 Pfam ABC-transporter N-terminal 87 138 IPR029481 -
Mal3g3928 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 843 1097 IPR003439 GO:0005524
Mal3g3928 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 419 IPR027417 -
Mal3g3928 1444 Gene3D - 858 1084 IPR027417 -
Mal3g3928 1444 Pfam ABC transporter 872 1024 IPR003439 GO:0005524
Mal3g3928 1444 Gene3D - 149 458 IPR027417 -
Mal3g3928 1444 Pfam Plant PDR ABC transporter associated 716 779 IPR013581 -
Mal3g3928 1444 CDD ABCG_PDR_domain2 840 1079 IPR034003 -
Mal3g3928 1444 Pfam ABC-2 type transporter 1169 1383 IPR013525 GO:0016020|GO:0140359
Mal3g3928 1444 Pfam ABC-2 type transporter 499 711 IPR013525 GO:0016020|GO:0140359
Mal3g3928 1444 SMART AAA_5 172 397 IPR003593 -
Mal3g3928 1444 SMART AAA_5 881 1073 IPR003593 -
Mal3g3928 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 147 420 IPR003439 GO:0005524
Mal3g3928 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 860 1074 IPR027417 -
Mal3g3928 1444 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 1444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3928 Mal-Chr3 117360143 117369270 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3928 K08711 - gmx:732607 2426.36