Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3926 ATGGACGCTGAGCAACTGAGAGAGCATGCTCATAAGATGGTTGACTTCATTGCTGATTACTACAAAACTATTGAAAACTTCCCAGTTCTTAGCCAAGTTCAGCCAGGTTATCTTGGAAAGCTACTACCAGATTCTGCTCCTACTCACCCCGAATCATTGCAGCATGTTTTGAATGATGTACAGGAAAAGATACTACCTGGGGTGACACATTGGCAAAGCCCTAACTATTTTGCATATTTTCCTTCCAATGGTAGCATTGCTGGTTTTTTAGGAGAGATGCTTAGTGCTGGTCTCAACATTGTGGGCTTCAGCTGGATAACTTCTCCTGCAGCAACTGAACTCGAAACGATAGTCCTCGACTGGCTTGCCAAGGCACTCCTTCTGCCTCCTGATTTCTTTTCTACCGGGCAAGGAGGTGGAGTTATACAGGGAACAGCAAGTGAAGCTGTGCTAGTAGTGTTGGTGGCTGCCCGTGACAAGATCCTGCGGGCGGTTGGACGGAACGCTCTTCCTAAGCTTGTGACATATGCATCTGACCAAACACACTCCGCTTTACAAAAAGCCTGCCAGATAGGAGGACTTAATCCAGAGCTTTGCAGGTTGCTTAAAACGGATTCTTCCACAAGTTTTGCGCTTTCCCCTGATGTACTTTCTGAAGCAATTTCAAATGACATTGCCAGTGGTCTTATACCCTTTTTCTTCTGTGCTACCGTTGGTACTACTTCATCAACAGCTGTTGACCCTCTACCTGCATTGGCAAAAGTCACTAGGCCCAACAACATTTGGTTTCATGTGGATGCTGCTTATGCTGGAAGTGCTTGTATATGTCCAGAGTACCGTCACTTCATTGATGGGGTTGAAGAAGCAGATTCATTTAACATGAATGCACATAAATGGTTCCTTACTAACTTCGACTGTTCAGTACTTTGGGTTAAGGACAGAAGTGCTCTGATTCAGTCGCTGTCTACAAATCCAGAATTTCTGAAAAATAAGGCCTCTCAAGAAAACACGGTCATAGATTACAAAGACTGGCAAATTCCTCTTGGGCGTCGGTTTAGATCATTAAAACTGTGGATGGTGTTGCGACTTTATGGATTGGAAGGCCTGCGAACTCACATAAGAAACCATATTGCAATGGCAACTTATTTTGAGGAGCTTGTTGTTAAAGACACTAGATTCAAGGTCGTTGCGCCTCGAACATTCTCTTTAGTTTGTTTTCGGCTTTTGCCTCCCCCATACTCTGATGATAATGGCAATAAACTGAACCATGATCTACTCGACACTGTAAATTCAACAGGAAGTGTTTTCATAACACACACGGTTCTATCAGGTGAGTACATTCTACGTTTCGCAGTTGGAGCACCATTGACAGAAGTGAGGCATGTCAATGCGGCGTGGCAGATTTTGCAAGAAAAAGCCACTGCTCTATTAGAGAGTTTACAGGATGAATCTGCTCTCACAGCATCCACCGTTGCTTATTGA 1482 0.4413 MDAEQLREHAHKMVDFIADYYKTIENFPVLSQVQPGYLGKLLPDSAPTHPESLQHVLNDVQEKILPGVTHWQSPNYFAYFPSNGSIAGFLGEMLSAGLNIVGFSWITSPAATELETIVLDWLAKALLLPPDFFSTGQGGGVIQGTASEAVLVVLVAARDKILRAVGRNALPKLVTYASDQTHSALQKACQIGGLNPELCRLLKTDSSTSFALSPDVLSEAISNDIASGLIPFFFCATVGTTSSTAVDPLPALAKVTRPNNIWFHVDAAYAGSACICPEYRHFIDGVEEADSFNMNAHKWFLTNFDCSVLWVKDRSALIQSLSTNPEFLKNKASQENTVIDYKDWQIPLGRRFRSLKLWMVLRLYGLEGLRTHIRNHIAMATYFEELVVKDTRFKVVAPRTFSLVCFRLLPPPYSDDNGNKLNHDLLDTVNSTGSVFITHTVLSGEYILRFAVGAPLTEVRHVNAAWQILQEKATALLESLQDESALTASTVAY* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3926 493 Gene3D Aspartate Aminotransferase, domain 1 375 487 IPR015422 GO:0003824
Mal3g3926 493 CDD DOPA_deC_like 76 471 - -
Mal3g3926 493 Gene3D - 83 374 IPR015421 GO:0003824
Mal3g3926 493 Pfam Pyridoxal-dependent decarboxylase conserved domain 35 408 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mal3g3926 493 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 1 479 - -
Mal3g3926 493 Gene3D - 1 81 - -
Mal3g3926 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 113 132 IPR010977 GO:0006520|GO:0016831
Mal3g3926 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 47 66 IPR010977 GO:0006520|GO:0016831
Mal3g3926 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 347 362 IPR010977 GO:0006520|GO:0016831
Mal3g3926 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 29 46 IPR010977 GO:0006520|GO:0016831
Mal3g3926 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 94 112 IPR010977 GO:0006520|GO:0016831
Mal3g3926 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 138 158 IPR010977 GO:0006520|GO:0016831
Mal3g3926 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 6 25 IPR010977 GO:0006520|GO:0016831
Mal3g3926 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 390 409 IPR010977 GO:0006520|GO:0016831
Mal3g3926 493 PRINTS Aromatic-L-amino-acid decarboxylase signature 73 92 IPR010977 GO:0006520|GO:0016831
Mal3g3926 493 SUPERFAMILY PLP-dependent transferases 1 474 IPR015424 -
Mal3g3926 493 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 291 312 IPR021115 GO:0016831
Mal3g3926 493 PANTHER BNAA07G00240D PROTEIN 1 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3926 Mal-Chr3 117340201 117345605 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3926 K01593 - gmx:100791074 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3926 3 117340201 117345605 Mal3g3926 3 117340201 117345605 ECH