Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3913 ATGGAAGCTAGTGAAAGTATGGATCTTGCAAATAATGTTCTCGCTCGGGCGAGCCAAGTTTTTGTCAAGAGACAACCCGAGATACATCTTTTTTGCGCTCGGTTCAGGGAGCAGGCTGGAGATATAGTCGGTGCTAGAGCTGCGTATCAACTTGTACACACTGAAATTTCTCCAGGTCTTCTTGAAGCAATAATCAGGCATGCCAATATGGAACATCGACTGGGGAAGTTGGAGGATGCCTTCTCTTTGTATGAACAGGCCATTGCCATTGAGAAAGGAAAAGAACATTCACAAACACTGCCAATGTTATTTGCTCAGTATTCTCGATTTGTTTATTTGGCTTCTGGGAATTCCGAAAAGGCTAGAGAGATTCTAGTTGGGGGGCTTGAGAATGCTTCACCGTCAAAGCCACTACTTGAGGCTTTGTTGCATTTTGAGGCTATTCAACCCCAGCCAAAGCGAGTCGACATTGACTTTCTAGAGTCATTGGTTGTAAAATTTGTAACTCCCAACCCAGAGAACCCTGGTGTAGCAAGTGCAACAGAGCGCGAAGAACTTTCTAACATTTTTCTGGAGTTTCTAAATCTCTTTGGAGATGTTCAATCTATCAAAAGGGTTGAGGATAGACATGCCAAACTGTTCTTGCCACACAGGGGCATGTCGGAATTGAAAAAACGTCATGCAGAGGATTTCTTAGCTTCAGATAAAACAAAAGTGTCGAGAGCTTATTCTGCTCAATCACCTGCCCAATCTGTAGTGGGTGCATATCCAAATGGACCTAACCAATGGACTAACTATGGAGTACAGCCTCAAACTTGGCCAGCAACCACTCAAGCACAAGGACAACAATGGCCTGCTGGGTACACCCAGCAGCAGGCTGCTGCCTCCTATGGGGCTTATGCTGGATATGGAGGCAACTATGCTAACCCACAATTGCCTGCATCAGTTACACAAAGCACTGCTTATGGAGCCTATCCTCCTGCATATCCTGCACAGCCGGCACTGCCTCAACAAAATTACGCACAACCTGTTGCAGCCCCGACACAGCAACCTGCAGCAGTTCCTCAGGCATATTACGGGAATTACTACTGA 1092 0.4597 MEASESMDLANNVLARASQVFVKRQPEIHLFCARFREQAGDIVGARAAYQLVHTEISPGLLEAIIRHANMEHRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNSEKAREILVGGLENASPSKPLLEALLHFEAIQPQPKRVDIDFLESLVVKFVTPNPENPGVASATEREELSNIFLEFLNLFGDVQSIKRVEDRHAKLFLPHRGMSELKKRHAEDFLASDKTKVSRAYSAQSPAQSVVGAYPNGPNQWTNYGVQPQTWPATTQAQGQQWPAGYTQQQAAASYGAYAGYGGNYANPQLPASVTQSTAYGAYPPAYPAQPALPQQNYAQPVAAPTQQPAAVPQAYYGNYY* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3913 363 Gene3D Tetratricopeptide repeat domain 1 250 IPR011990 GO:0005515
Mal3g3913 363 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 1 350 - -
Mal3g3913 363 PANTHER PRE-MRNA-PROCESSING FACTOR 39 1 350 - -
Mal3g3913 363 SUPERFAMILY TPR-like 6 217 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3913 Mal-Chr3 117188781 117193602 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3913 K13217 - gmx:100787373 537.339