Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3878 ATGGATGGTGGAAAGAAATCACACGAACAAGCAGGTCCATCTTCTTCTATTGAAAAAACCAAACAACAAATCACCGAAAAACCCACTCACACTTTTCATGTTGCTAGTGAAGACGAGGAAGATGAAGATCAAGTCTTTGTTCCTAGTCCTCTTCTTTCTCTCAAGGAACAGATTGAAAAGGACAAGGAGGATGAAAGTCTAAGGAGGTGGAAGGAGAAGCTGTTGGGTTGCTTGGAAAGTGATTTAGATGGTCAATTGGATCCTGAAGTAAAATTCCACTCCATTGGAATTCTGTCTGAGGATTTCGGTGAAATCGTTACTCCTTTACCTGTGGAAGAAAATCAGAACGGTTGTACACTATTCACTCTAAGGGAGGGATCTCGCTATCAGCTTAAGCTACAATTTAGTGTTATGCACAACCTTGTCTCTGGCTTGACTTACTCTAACACCGTGTGGAAAGGAGGACTTCAAGTTGATCAGAGTAAAGGAATGTTGGGTACTTTTGCTCCCCAAAAGGATCCATATGTATATGCCTTGAAAGAGGACACCACTCCTTCTGGTGCACTTGCAAGGGGTGTTTACTCGGCAAAACTCAAGTTTGAAGATGATGACAAAAGGTGTCATATGGAACTCAAATATTCGTTCGAGATTAAAAAAAGCGGCTAA 666 0.4144 MDGGKKSHEQAGPSSSIEKTKQQITEKPTHTFHVASEDEEDEDQVFVPSPLLSLKEQIEKDKEDESLRRWKEKLLGCLESDLDGQLDPEVKFHSIGILSEDFGEIVTPLPVEENQNGCTLFTLREGSRYQLKLQFSVMHNLVSGLTYSNTVWKGGLQVDQSKGMLGTFAPQKDPYVYALKEDTTPSGALARGVYSAKLKFEDDDKRCHMELKYSFEIKKSG* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3878 221 PANTHER RHO GDP-DISSOCIATION INHIBITOR 4 219 IPR000406 GO:0005094|GO:0005737
Mal3g3878 221 MobiDBLite consensus disorder prediction 23 37 - -
Mal3g3878 221 Pfam RHO protein GDP dissociation inhibitor 35 219 IPR000406 GO:0005094|GO:0005737
Mal3g3878 221 SUPERFAMILY E set domains 33 220 IPR014756 -
Mal3g3878 221 MobiDBLite consensus disorder prediction 1 48 - -
Mal3g3878 221 PANTHER RHO GDP-DISSOCIATION INHIBITOR 1-LIKE 4 219 - -
Mal3g3878 221 Gene3D Coagulation Factor XIII, subunit A, domain 1 45 220 IPR024792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3878 Mal-Chr3 116684479 116687512 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3878 K12462 - gmx:100810029 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3878 3 116684479 116687512 Mal3g3878 3 116684479 116687512 ECH