Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3858 ATGGACAAATCAAAGCTAGCTCAATTCGGCGAGAGGCTCAAAACCAGCAGCGCCAACATGAGTCGAATCGTTAGCGGTAAAATGAAAGAAATTCTCCAAACTCCAACACCAGAATCAAAGATGGTAGACGAAGCAACATCGGAAACGTTAGAGGAACCAAATTGGGGTATGAATCTCAGAATTTGTGGCCTTATTAACGCTGAAGAGTTTAATGGTTCTGAAATTGTGAAAGCTATTAAGAGAAGGATTAATCATAAGAGTCCTGTTGTTCAGAAACATAGCCTTGATTTGTTGGAAACTTGTGCTATGAATTGTGAGAAAGTTTTTTCTGAAATTGCTTCTGAGAAGGTGCTGGATGATATGGTTAGGTTGATTGAGAATAATCAGGCTGATGGGGGTAATAGAAGAAGGGCTTTTCAGTTGATTAGGGCTTGGGGTGAGTCTCAGGATATTGCTTATCTTCCTGTTTTCAGTCAAACTTATCTGAGTTTGAAAGGAAGGGGTGAATCACTTGACATGGCAGCACGAAATTCACCACCTATTCCGTATGCCTCTGAGTCACATTCTTATCAAAATCCTTTAGACCCCCCTGAAAGATACCCAGTTCCAGAAGCAGGGTTACATGCTCTTGCTCTGGATGACTCAGCAGCTTTCTTTTCTGATCACCAACCAGCATCAGCTGAAGAGAAGAAAGAGCATCTTGTGGTTGCTCGAAACAGTCTTGAATTGCTCTCTAGCATATTAAATTCTGTGGCAGAGCCAAAACCTCTAAAGGAAGATTTAACTTTGAGTCTGCTGGATAAGTGCAAACAATCACTGTTTATTATCAAGGAGATTGTGGAAAGCACCGCAAATGATGAAGAGACACTTTTTGAGGCTTTATATCTCAATGATGAGCTGCAGCAGTTGGTTTCTAAGTATGAGGAGTTGGAAGCTTCTCAAAGTTCAGAGGCACAACAGGCACAAAGTGTTGACACTGCTGGGCATTATGTGGAAGCAGTTCAAAACCCCAGTGAAAGGCGTGAAATGGAAGCTGTTCAAAACCCCAGTGAAAGGCGTGAAGGTGATGAGTCCGAAGAGCTGTCAGAAGCTACTCAGAGTCTTGATCGAAAGCTGCCTCAAAAATCAAACACTCGTGAAGTCGATGCCAATGCAACTAAGGAGGATGGTCAAAACACTCGTGAAGTCGATGTCAATGCAACCAAGGAGGATGGTCATGTTGAAACTAAAATAGTGGATAGCACGAAAGAGAAGAATGGTGAACCTAGCCTCAAGAGTAATACCGAATGA 1290 0.4233 MDKSKLAQFGERLKTSSANMSRIVSGKMKEILQTPTPESKMVDEATSETLEEPNWGMNLRICGLINAEEFNGSEIVKAIKRRINHKSPVVQKHSLDLLETCAMNCEKVFSEIASEKVLDDMVRLIENNQADGGNRRRAFQLIRAWGESQDIAYLPVFSQTYLSLKGRGESLDMAARNSPPIPYASESHSYQNPLDPPERYPVPEAGLHALALDDSAAFFSDHQPASAEEKKEHLVVARNSLELLSSILNSVAEPKPLKEDLTLSLLDKCKQSLFIIKEIVESTANDEETLFEALYLNDELQQLVSKYEELEASQSSEAQQAQSVDTAGHYVEAVQNPSERREMEAVQNPSERREGDESEELSEATQSLDRKLPQKSNTREVDANATKEDGQNTREVDVNATKEDGHVETKIVDSTKEKNGEPSLKSNTE* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3858 429 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Mal3g3858 429 MobiDBLite consensus disorder prediction 373 423 - -
Mal3g3858 429 ProSiteProfiles GAT domain profile. 187 312 IPR004152 GO:0035091|GO:0043130
Mal3g3858 429 Pfam GAT domain 238 311 IPR004152 GO:0035091|GO:0043130
Mal3g3858 429 Pfam VHS domain 38 148 IPR002014 GO:0035091|GO:0043130
Mal3g3858 429 PANTHER TOM1-LIKE PROTEIN 2 1 371 - -
Mal3g3858 429 PANTHER TOM1-LIKE PROTEIN 1 1 371 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mal3g3858 429 SUPERFAMILY GAT-like domain 193 311 - -
Mal3g3858 429 CDD VHS 39 165 - -
Mal3g3858 429 SUPERFAMILY ENTH/VHS domain 34 168 IPR008942 -
Mal3g3858 429 MobiDBLite consensus disorder prediction 333 429 - -
Mal3g3858 429 Coils Coil 293 313 - -
Mal3g3858 429 MobiDBLite consensus disorder prediction 335 366 - -
Mal3g3858 429 Gene3D - 215 315 IPR038425 -
Mal3g3858 429 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Mal3g3858 429 Gene3D - 28 185 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3858 Mal-Chr3 116405048 116409091 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3858 - - mtr:MTR_7g097010 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3858 3 116405048 116409091 Mal3g3858 3 116405048 116409091 ECH