Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3852 ATGTCCTGCATAAGCCTAAGGCTTCCACCTGCTAGAAAGGTATGGAAAAGCTTCACTTCTAAACTTGGAAGTAAACTTCACAACATTCGTAAATCCAAAGCCATGAAAAAACCAAGAAAGCTTCTAAACACAAAAACTATAAAACCATCTACCAGTATCACAACCAAGCCACATAAACTCCTTGCAACTAAGCGTTTTCGGCGCAAAAGGTTAGCTACTGTTAGAAGTGTATTCTGCAGCTTCAACAAAAAGCCTGCACCTGTTTATATTGATAAGCTCTTCAAAGAGCCTCCTTGTGAATTAGTGGGTTATTTGACACCAATTCACAGACCACGAATCGAAATAACTGCGAAGATCGGTGATTATCAGAGAGAGAAGAAAGAAGTGGCAGAAGGAACAAGCAATGGATCATGTGACAGAACTAGTACATCAGATGATATGTGGGAGTCAGTGGCATTAGCTTCACCTCAAATGCAAGGAATTGATGAACGAGCAGAGGAATTCATTACCAAGTTCAGAAAGCAGATGGCGGCTCAAGAGAGATTAGCAAGAAGTTTGTAG 561 0.4064 MSCISLRLPPARKVWKSFTSKLGSKLHNIRKSKAMKKPRKLLNTKTIKPSTSITTKPHKLLATKRFRRKRLATVRSVFCSFNKKPAPVYIDKLFKEPPCELVGYLTPIHRPRIEITAKIGDYQREKKEVAEGTSNGSCDRTSTSDDMWESVALASPQMQGIDERAEEFITKFRKQMAAQERLARSL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3852 186 PANTHER COTTON FIBER (DUF761) 1 185 - -
Mal3g3852 186 PANTHER DUF761 DOMAIN PROTEIN 1 185 - -
Mal3g3852 186 Pfam Cotton fibre expressed protein 160 179 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3852 Mal-Chr3 116339626 116340186 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3852 - - gmx:100776152 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3852 3 116339626 116340186 Mal3g3852 3 116339626 116340186 ECH