Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3844 ATGTCTTTCAGAGGTCTCAGCCGGCCAAATGCTTCATCAGGCATGGGTGTTGATGAGAACAGCAAAAACACCTTCATGGAGTTGAAGCAAAAGAAGGTCCATCGTTATGTCATCTTTAAGGTTGATGAAAAGAAAAGGGAGGTTGTGGTTGAGAAGACCGGCGGTCCTGCTGAGAGTTATGACGATTTTGCTGCGTCTTTGCCTGAGAATGATTGCAGATATGCTGTGTTTGACTTTGATTTTGTCACTTCTGAGAACTGTCAAAAGAGCAAAATCTTCTTCATTGCATGGTCTCCTTCAACATCTCGAATCCGTGCCAAGATGCTCTATGCCACAACTAAAGAAAGGTTTAGACGCGAGCTAGATGGTGTCCATTATGAAATCCAGGCTACCGACCCCACAGAAATGGATCTTGAAGTGCTGAGGGACCGAGCACACTGA 441 0.4512 MSFRGLSRPNASSGMGVDENSKNTFMELKQKKVHRYVIFKVDEKKREVVVEKTGGPAESYDDFAASLPENDCRYAVFDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATTKERFRRELDGVHYEIQATDPTEMDLEVLRDRAH* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3844 146 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 1 146 - -
Mal3g3844 146 SUPERFAMILY Actin depolymerizing proteins 11 146 - -
Mal3g3844 146 Pfam Cofilin/tropomyosin-type actin-binding protein 22 143 IPR002108 GO:0003779
Mal3g3844 146 SMART adf_2 19 146 IPR002108 GO:0003779
Mal3g3844 146 Gene3D Severin 5 146 IPR029006 -
Mal3g3844 146 ProSiteProfiles ADF-H domain profile. 12 146 IPR002108 GO:0003779
Mal3g3844 146 CDD ADF_cofilin_like 13 145 IPR017904 GO:0015629|GO:0030042
Mal3g3844 146 PANTHER COFILIN-RELATED 1 146 IPR017904 GO:0015629|GO:0030042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3844 Mal-Chr3 116280169 116284186 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3844 K05765 - gmx:100819975 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3844 3 116280169 116284186 Mal3g3844 3 116280169 116284186 ECH