Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3821 ATGTCGAACCCTCAAAACGCGAAGCCATGGAAAGCAGAATACGCAAAATCAGGTCGTTCATCATGCAGAACCTGCAAAAGTCCCATTGCCACCGAGAAGCTTCGTCTTGGCAAAATGGTTCAATCCTCCAAATTCGATGGCCTCATGCCCATGTGGAATCATGCTGAGTGCATATTGAAGAAAGCAAACCAGATAAAATCAGCTGATGATGTTGAAAACTTAGAGTCGCTTCGTTGGGAAGATCAGCAGAAGATTAGGAAATACATTGAGAGTGGTGGTGGTGGTGGCACACCGAAGTCGAATGCTGGTTCAAAGTCGAATGCCGCCTCAAAGTCGAGTTCTGGAAAAAATGTTGAATATGCTATTGAAGTTTCGCAAACTTCACGTGCTGCTTGCAAGCATTGTGGTCAAAAAATTATCAAAGGAGAGGTTCGCATATCTACTAAGCCTGATGGTCAAGGTGCCAGGGGTTTGGCTTGGCACCATGCCAAGTGTCTCTTGGAACTATCTCCATCAATTCAAGTGGATAATTTGCCTGGATGGAATAGTCTCTCATCTTCTGATCAATCGGCTGTCAGTGAGTTGGCTATGAAAGACCATCCTACAAATAAAGGAGGTGGTAGTGGTGCAAATGTCGAGGCTGAAGATGTTAAAGAATCCACACAACAATCCTCTTCCAAAGGTGGCACAAAACGGGGGAAAGATGCAGAGGGTGAGCAGAAGTCAAAGACTGCTAAAGTCAAAGGAGATGTGTCTGTGAGCAGGGTAGTGGCAGTGAAAAATGCTGATGACTCCGGGGAGGCACGTGATCTTGAGAATAGACTGGAGGCCCAGAGCAAAGATCTCTGGGCTCTGAAGGATGATCTTAAAAAGCATGTGACAACCGCAGAGATGCGTGAAATGCTGGATGCCAATGGTCAAGATTCAACAGGATCAGAGCTTGATTTGCGTGACCGCTGTGCTGATGGAATGATGTTTGGAGGACTTAGTCCTTGCTCACTATGTTCTGGTTTTCTGCGTTATTCCGGAGGAATGTACCGGTGCACTGGATACATTTCTGAGTGGAGTAAATGTTCCTACTCTACCTGCGAACCAAAGCGTGCTGAAGGGAAGTGGAAAATCCCAAAGGAAACAGATAATCAGTACCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAAACCAACTAGGATATTGCCTCCGCCATCATCAAGGACTTCTGCTGAAAATCAAATTTCTGCAGGCCAGCACCAATCATCAAACAGTGAAACTTTGGCTGATTTGAAAGTTGCCATCTCTGGGTTGCCTGAAGATTCCATTAAGGAATGGAAACACAAAATTGATGCCATAGGTGGAGTGCTTCATGCAAAAGTGAAGAAAGATACTAACTGCTTGGTGGTCAGTGGAGCGCTTAAGGATGAAGTTGAGATGCGGAAGGCAAGGAGGATGAAAATACCGATAGTCAGAGAGGATTATTTGGTTGACTGTATGGAAAGAAAGAAGAAGCTTCCATTTGATATGTACAAAGTTGAAATGATTGGTGAGGCTTCTAGCATGGTCACCATCAAAGTGAAGGGGCAAAGTGCTGTTCATGATGCTTCTGGCCTACAGGATTCTGGCCACATACTAGAGGAAGGGAAAAGCATATATAATACAACTTTGAATATGTCTGATTTGTCTACTGGTATTAACAGCTACTACATCCTGCAAATAATTGAAGAAGATAATGGGTCAGATTGCTACGTGTTTCGCAAATGGGGTCGAGTGGGAAATGACAAGATTGGAGGGAATAAACTGGAGGAAATGTCGAAATCTGATGCAATCAGGGAATTCAAACGACTATTCTTTGAGAAAACTGGAAACCCTTGGGAGGCCTGGGAACAAAAGACTATTCAGAAGCAACCTGGAAGATTCTTCCCCTTGGAAATTGATTATGGAGTTAACAAACAAGTCGCGAGAAAGAGTAAAAACAATGCAGACAGCAAATTACCCCCTCCATTAATAGAATTGATCAAGATGCTCTTTAATGTGGAAACATACAGATCCGCCATGATGGAATTTGAGATCAATATGTCCGAAATGCCACTCGGGAAACTGAGCAAAAGTAATATCCAAAAGGGTTTTGAAGCATTAACAGATATACAAAATCTTTTTAAAAGCAGCAATGATGATCCATCAGTCAGGGATAGCTTGCTTATTGATGCTAGCAATAGGTTCTTCACTGTGATCCCTTCCATTCATCCACATATTATTAGGGATGAGGATGATTTTAAGTCAAAGGTGAAAATGTTAGAAGCCCTTCAAGACATTGAAATAGCCTCACGATTAGTGGGATTTGACGCCAACAACGATGACTCCATTGATGATAATTATAAGAAGCTCCACTGTGGTATATCTCCACTTCCTCATGATAGTGAAGATTTTAGATTAGTTGAGAAGTTTCTACATAATACTCATGCCCCCACACATACGGAATGGAGTCTTGAGCTAGAAGAAGTTTTTTCACTTGAAAGAGAAGGTGAATTTGATAAATATGCTCCTTACAGGGACAAAGTTGGTAACAGAATGCTCCTATGGCATGGTTCTAGGTTGACGAACTTTGTGGGCATTCTTAACCAAGGACTCAGAATTGCACCTCCCGAAGCCCCTGCAACTGGCTACATGTTTGGCAAAGGGATTTACTTTGCTGACCTTGTCAGCAAGAGTGCTCAGTATTGCTTCACTGATAAGAAAAATCCTGTTGGTCTAATGCTTTTGAGTGAAGTTGCCCTTGGAAATGTGTATGAGCTCAAAAAAGCTAAGTATATGGATAAACCTCCGCAAGGAAAGCATTCTACAAAAGGACTGGGCAAGAAAATGCCCCTTGAATCAGAATATGTAAAGTGGAGAGGTGACGTCGTTGTTCCTTGTGGGAAACCAGTGCCATCAAATGTCAAGGCATCTGAGCTCATGTACAATGAGTTTATTGTCTATAATACCGCTCAAGTTAAACTGCAATTCTTGTTGAAGGTGAGGTTCCATCACAAGAGATGA 3033 0.4253 MSNPQNAKPWKAEYAKSGRSSCRTCKSPIATEKLRLGKMVQSSKFDGLMPMWNHAECILKKANQIKSADDVENLESLRWEDQQKIRKYIESGGGGGTPKSNAGSKSNAASKSSSGKNVEYAIEVSQTSRAACKHCGQKIIKGEVRISTKPDGQGARGLAWHHAKCLLELSPSIQVDNLPGWNSLSSSDQSAVSELAMKDHPTNKGGGSGANVEAEDVKESTQQSSSKGGTKRGKDAEGEQKSKTAKVKGDVSVSRVVAVKNADDSGEARDLENRLEAQSKDLWALKDDLKKHVTTAEMREMLDANGQDSTGSELDLRDRCADGMMFGGLSPCSLCSGFLRYSGGMYRCTGYISEWSKCSYSTCEPKRAEGKWKIPKETDNQYLKKWFKSQKGKKPTRILPPPSSRTSAENQISAGQHQSSNSETLADLKVAISGLPEDSIKEWKHKIDAIGGVLHAKVKKDTNCLVVSGALKDEVEMRKARRMKIPIVREDYLVDCMERKKKLPFDMYKVEMIGEASSMVTIKVKGQSAVHDASGLQDSGHILEEGKSIYNTTLNMSDLSTGINSYYILQIIEEDNGSDCYVFRKWGRVGNDKIGGNKLEEMSKSDAIREFKRLFFEKTGNPWEAWEQKTIQKQPGRFFPLEIDYGVNKQVARKSKNNADSKLPPPLIELIKMLFNVETYRSAMMEFEINMSEMPLGKLSKSNIQKGFEALTDIQNLFKSSNDDPSVRDSLLIDASNRFFTVIPSIHPHIIRDEDDFKSKVKMLEALQDIEIASRLVGFDANNDDSIDDNYKKLHCGISPLPHDSEDFRLVEKFLHNTHAPTHTEWSLELEEVFSLEREGEFDKYAPYRDKVGNRMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCFTDKKNPVGLMLLSEVALGNVYELKKAKYMDKPPQGKHSTKGLGKKMPLESEYVKWRGDVVVPCGKPVPSNVKASELMYNEFIVYNTAQVKLQFLLKVRFHHKR* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3821 1010 Pfam Poly(ADP-ribose) polymerase, regulatory domain 661 791 IPR004102 GO:0003950
Mal3g3821 1010 Gene3D - 795 1010 - -
Mal3g3821 1010 ProSiteProfiles BRCT domain profile. 420 510 IPR001357 -
Mal3g3821 1010 MobiDBLite consensus disorder prediction 198 249 - -
Mal3g3821 1010 SUPERFAMILY BRCT domain 421 510 IPR036420 -
Mal3g3821 1010 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 661 795 IPR036616 GO:0003950
Mal3g3821 1010 MobiDBLite consensus disorder prediction 89 116 - -
Mal3g3821 1010 Pfam PADR1 (NUC008) domain 318 367 IPR012982 -
Mal3g3821 1010 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 123 194 IPR001510 GO:0003677|GO:0008270
Mal3g3821 1010 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 13 89 IPR001510 GO:0003677|GO:0008270
Mal3g3821 1010 SUPERFAMILY ADP-ribosylation 794 1009 - -
Mal3g3821 1010 ProSiteProfiles WGR domain profile. 539 638 IPR008893 -
Mal3g3821 1010 MobiDBLite consensus disorder prediction 215 229 - -
Mal3g3821 1010 SUPERFAMILY WGR domain-like 518 643 IPR036930 -
Mal3g3821 1010 SMART WGR_cls 550 633 IPR008893 -
Mal3g3821 1010 Coils Coil 268 288 - -
Mal3g3821 1010 SMART zf_PARP_3 13 90 IPR001510 GO:0003677|GO:0008270
Mal3g3821 1010 SMART zf_PARP_3 123 197 IPR001510 GO:0003677|GO:0008270
Mal3g3821 1010 MobiDBLite consensus disorder prediction 230 248 - -
Mal3g3821 1010 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 50 1004 - -
Mal3g3821 1010 CDD parp_like 661 1005 - -
Mal3g3821 1010 Pfam Poly(ADP-ribose) polymerase catalytic domain 805 1006 IPR012317 GO:0003950
Mal3g3821 1010 Pfam WGR domain 550 628 IPR008893 -
Mal3g3821 1010 PANTHER DNA LIGASE 50 1004 - -
Mal3g3821 1010 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 10 93 IPR001510 GO:0003677|GO:0008270
Mal3g3821 1010 Gene3D BRCT domain 415 517 IPR036420 -
Mal3g3821 1010 MobiDBLite consensus disorder prediction 97 116 - -
Mal3g3821 1010 Gene3D - 651 794 IPR036616 GO:0003950
Mal3g3821 1010 SMART PADR1_2 316 369 IPR012982 -
Mal3g3821 1010 ProSiteProfiles PARP alpha-helical domain profile. 660 778 IPR004102 GO:0003950
Mal3g3821 1010 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 118 204 - -
Mal3g3821 1010 Gene3D - 112 219 IPR036957 GO:0003677|GO:0008270
Mal3g3821 1010 Gene3D - 2 111 IPR036957 GO:0003677|GO:0008270
Mal3g3821 1010 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 120 194 IPR001510 GO:0003677|GO:0008270
Mal3g3821 1010 Pfam BRCA1 C Terminus (BRCT) domain 422 497 IPR001357 -
Mal3g3821 1010 CDD WGR_PARP1_like 540 645 - -
Mal3g3821 1010 SMART BRCT_7 422 500 IPR001357 -
Mal3g3821 1010 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 97 - -
Mal3g3821 1010 MobiDBLite consensus disorder prediction 400 421 - -
Mal3g3821 1010 Gene3D - 255 327 - -
Mal3g3821 1010 ProSiteProfiles PARP catalytic domain profile. 785 1010 IPR012317 GO:0003950
Mal3g3821 1010 MobiDBLite consensus disorder prediction 389 421 - -
Mal3g3821 1010 PIRSF NAD_ADPRT 3 1010 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Mal3g3821 1010 Gene3D - 328 388 IPR038650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3821 Mal-Chr3 115983448 115997626 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3821 K24070 - gmx:100800968 1706.42