Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3820 ATGTCCACGAATTCGCTTAACGGCGTCGCTTCGTGCTCATCGGAGATGGAGAAGTTCCTCTGCGAGTTGCTGTTGGACTCAAACCAGCCCATCTCCGAACGCTTCAGAGCTCTCTTCTCTCTTCGCAACCTCAAAGGCCCCGCTCCTCGCACCGCCCTTATTCTCGCAACGAGAGATTCATCGAATTTGCTGGCGCACGAAGCTGCGTTTGCATTAGGTCAAATGCAAGAACTGGAAGCCATCCCTGCATTGACTTCAGTTCTTAATGATCTTTCTTTGCATCCCATTGTTCGCCATGAGGCAGCTGAAGCACTTGGCGCTATTGGTTCGGATGGTAATGTTTCTCTGTTAAAGCTTAGTTTGGATTCTGATCCGGCTCAAGAGGTTCGAGAAACGTGTGAATTGGCTCTTCAACGTATTCTGAATTTAAAACACGCTGCTGTTACTGATGAGTTAACCGCACCTGGTATTTCTCCGTTTAAGTCTGTTGATCCTGCAGCACCGGCCAGCTCTTGTTCTTCAGTTAATCAACTAAGGGAGTTACTTCTTGACGAGGAAAAGGGAATGTATGAGCGCTATGCAGCTCTTTTTGCACTTCGAAATGATGGTGGAAATGAAGCTGTTGCTGCTATTATTGATTCCTTGGGTTCCAAGAGTGCTTTACTGAAACATGAGGTTGCATATGTTTTGGGCCAATTGCAAGACAAAGCTGCTTCAGCTGCTCTATCCAATATACTAAGAGATGTGAATGAGCACCCAATGGTTAGACACGAGGCTGCTGAAGCTCTTGGTTCAATTGCAGATGACCAAAGTGTATCCCTTCTTGAGGAGTTTTCGGCAGACCCAGAGCCTCTTGTCGCACAAAGTTGTCAAGTTGCTCTAAGCATGCTAGAATTTGAAAGATCAGGGAAATCGTTTGAGTTCCTGTTCATGCGTACTCCAATTGTACATTAA 954 0.4612 MSTNSLNGVASCSSEMEKFLCELLLDSNQPISERFRALFSLRNLKGPAPRTALILATRDSSNLLAHEAAFALGQMQELEAIPALTSVLNDLSLHPIVRHEAAEALGAIGSDGNVSLLKLSLDSDPAQEVRETCELALQRILNLKHAAVTDELTAPGISPFKSVDPAAPASSCSSVNQLRELLLDEEKGMYERYAALFALRNDGGNEAVAAIIDSLGSKSALLKHEVAYVLGQLQDKAASAALSNILRDVNEHPMVRHEAAEALGSIADDQSVSLLEEFSADPEPLVAQSCQVALSMLEFERSGKSFEFLFMRTPIVH* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3820 317 Gene3D - 12 161 IPR011989 -
Mal3g3820 317 Hamap Deoxyhypusine hydroxylase [DOHH]. 17 307 IPR027517 GO:0008612|GO:0019135
Mal3g3820 317 SMART E-Z type HEAT repeats 189 218 IPR004155 -
Mal3g3820 317 SMART E-Z type HEAT repeats 31 60 IPR004155 -
Mal3g3820 317 SMART E-Z type HEAT repeats 95 124 IPR004155 -
Mal3g3820 317 SMART E-Z type HEAT repeats 253 282 IPR004155 -
Mal3g3820 317 SMART E-Z type HEAT repeats 220 249 IPR004155 -
Mal3g3820 317 SMART E-Z type HEAT repeats 62 91 IPR004155 -
Mal3g3820 317 PANTHER DEOXYHYPUSINE HYDROXYLASE 21 242 - -
Mal3g3820 317 PANTHER DEOXYHYPUSINE HYDROXYLASE 218 302 - -
Mal3g3820 317 Gene3D - 162 306 IPR011989 -
Mal3g3820 317 SUPERFAMILY ARM repeat 64 296 IPR016024 -
Mal3g3820 317 PANTHER PBS LYASE HEAT-LIKE PROTEIN 21 242 - -
Mal3g3820 317 PANTHER PBS LYASE HEAT-LIKE PROTEIN 218 302 - -
Mal3g3820 317 Pfam HEAT repeats 55 137 - -
Mal3g3820 317 Pfam HEAT repeats 222 294 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3820 K06072 - gmx:100815364 521.931