Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3748 ATGATGATGAGTGTTCAATTTCAATTATCATCATCATCCTCATGCTTATGGCTTCCAAATTCTCCATCTCCACATTTTCTTCCCAACCGCAGTAGCAGATTCTCCACTTCACCTCTCGCTGCCACACCAACACTCTCATCTCAATCTCCCACCATTCAGATAATTGGTAACAACAACAACAACACATTTGATGGTTATCAAGGAGGGACTGATATTTGGACTGCTCTTGACGCTGATCTTTATCACTGGACAAAGGTTTTACGCCCTGTGCAGTGGTTTCCTGGTCATATTGCTAAAGCAGAAAAGGAATTGAAGGAACAACTTAAGTTGATGGATGTTGTTATTGAGGTGCGCGATGGGCGAATTCCGTTGTCCACAAGTCATCCACAGATGGATATATGGCTTGGTAATAAAAAGAGAATTCTGGTTTTAAATAGAGAAGACATGATATCAACTGCAGATCGAAATGCTTGGGCAGGGTATTTTACTAGGCATGGAACAAAGGTTGTCTTCTCCAATGGGCAGCTTGGAATGGGCACATTGAAGCTAGGCCGGTTAGCAAAGGAATTAGCAGCTGATGTAAATGTTAAACGGAGAGCCAAAGGACTACTTCCTCGTCCGGTTCGAGCTGGAATAGTTGGATACCCTAATGTAGGAAAATCATCTCTGATCAACCGTTTGTTAAAGCGAAGAATGTGCCCAGCAGCTCCAAGGCCAGGAGTTACAAGAGATTTGAGGTGGGTTCAATTTGGGAAAGATCTTCAACTGCTGGATTCTCCTGGGATACTTCCAATGCGAATCAGTGACCAGTCAGCAGCCATAAAACTTGCCATATGTGATGACATTGGAGAGAGGTCTTATGATGTGGCTGATGTTGCTGCAATTCTTGTTCAGATGCTTACAAAGCTTCCAGCAGTAGGTCGAGATGCGCTTTGTAAACGATACAAGTTTCATGTAGACAGTGAATGTGGTAAAATATTTGTAGAGAAACTTGCACTTCATTTGTTCAACGGAGATGTTCATCAAGCAGCATACCGTGTCCTGTCAGATTTTAGAAAAGGTAGGTTCGGTTGGACTTCATTGGAGAGGCCTCCTAGGTGA 1101 0.4314 MMMSVQFQLSSSSSCLWLPNSPSPHFLPNRSSRFSTSPLAATPTLSSQSPTIQIIGNNNNNTFDGYQGGTDIWTALDADLYHWTKVLRPVQWFPGHIAKAEKELKEQLKLMDVVIEVRDGRIPLSTSHPQMDIWLGNKKRILVLNREDMISTADRNAWAGYFTRHGTKVVFSNGQLGMGTLKLGRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRDLRWVQFGKDLQLLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAAILVQMLTKLPAVGRDALCKRYKFHVDSECGKIFVEKLALHLFNGDVHQAAYRVLSDFRKGRFGWTSLERPPR* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3748 366 Pfam 50S ribosome-binding GTPase 210 280 IPR006073 GO:0005525
Mal3g3748 366 TIGRFAM GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 90 362 IPR019991 -
Mal3g3748 366 Gene3D - 268 356 IPR023179 -
Mal3g3748 366 PRINTS GTP1/OBG GTP-binding protein family signature 256 271 IPR006073 GO:0005525
Mal3g3748 366 PRINTS GTP1/OBG GTP-binding protein family signature 210 230 IPR006073 GO:0005525
Mal3g3748 366 Gene3D - 90 263 IPR027417 -
Mal3g3748 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 279 IPR027417 -
Mal3g3748 366 PANTHER DAR GTPASE 3, CHLOROPLASTIC 57 366 - -
Mal3g3748 366 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 57 366 - -
Mal3g3748 366 CDD YlqF 92 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3748 Mal-Chr3 114916355 114920128 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3748 K19828 - gmx:100784201 581.252