Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3741 ATGACCGATCGAAATACAGTTCGAGTCGTCGTCGCCGGTGACCGCGGCACCGGAAAATCAAGCCTGATCGCTGCCATAGCATCGGAGTCATTCCCCGATACCGTTCTTCCCGTTCTTCCGCCTACTCTCTTGCCCGCTGATTATTTCCCCGATTACGTTCCCCTTACCGTCATCGATACATCCTCTAGTCTGGAGAAACAAAACAAGCGTAATGAAGATTTGAAAGGCGCTGATGTTGTGATTTTAACATATGCTTGCAATGATTCACAGTCCTTTTCGCGATTGAGTTCTTACTGGTTTCGGGAACTGCAGAAGTTGGAGGTAAGAGTACCTGTAATTGTGGTTGGTTGCAAGCTAGATCTGCGAGATGAAAGCCAACAAGTGAGCTTAGAACGTCTCATGGCACAGCTCCTACAAGAGTTCAAGAATGTTGCCACCTGCATTGAATGCTCTGCAGCGACACTATACCAGGTCCCAGAAGTTTTTTATTTCGCTCAAAGAGCTGTACTACATCCAGTAGAGCCATTGTTTGATCATGAAAGTCAAGCTTTAACAGATCAATGTGTTAGGGCGTTGAGAAGAATATTTGTTCTTTGTGATCGTGACATGGATGATGCCCTCAATGATGCAGAACTAAGTGATTTTCAGGTTAGATGTTTCAATGAACCATTGCAGTTATCTCAAATAGCAGATGTCAAAACAGTTGTACAGCAGGATGTACCGGAAGGAATCAACTCACATGGTCTTACTTTTCCAGGATTTATGCATATACATAACATGTTCTTAAGAAAAGGGCACCCCGAGACATCATGGGCTGTGTTAAGAAACTTTGGATATGATAATGATTTAAAACTCAAGGATGATTTCCTTCCTGTTCCATCTAAGACTGCTCCTGATCAGAGTGTGGAGCTGACAGGTGAAGCTGTGGAGTTTCTAAATGGCATATTTAGACTATTGGATACCGATAAAGATCGAGCCCTAAAACCTGCCGAAGTGGACAAGCTATTCTGTACCGCTCCAGAAAGCCCATGGAATGATGCTCCATATAACGATGTTACTGAGAGAACTGATATGGGTTACATATCTCTTAACGGATTCCTATCCCAGTGGGCCCTTATGACATTACTTGATCCACCATGTAGCCTGGCGAATTTGATTTACATTGGATATAGCGGTAATCCTGCTGCAGCACTCCGTGTTACCCGTAGGAGATCAGTTGATCGCAAGAGAAAAGCGACAGAAAGGAATGTGTTCCAATGCTACGTTTTTGGTTCTAAAAATGCCGGGAAATCTGCTCTGTTGGATGCATTATTGGGAAGGCCTTTCTCAAATAATTATACTCCAACAACAGGTGAGAAGTTTGCTGCAAATGCCATTGAATTAATAGGGGGAACTAGGAAAACTCTTGTATTACGGGAGATACCTGAGAGTGAAGTATCAAAATTTCTGTCAAATCAGGATTATTTGGCAGCATGTGATGTAGCTGTTTTTGTGTATGACAGCTCAGATGAATTTTCATGGAAGAAATCCAGAGATTTGCTTGAGAAGGTTGCTGGGCAAGGTGATCTAACTGGTTATAGAGTTCCTTGCCTCCTTATTGCTGCTAAGGATGATCTAACTCCATATCCAAGGGCAGTGCAAGATTCAGTGAAGGTTACTCAGGAGTTGGGAATCGAGGCACCTATTCACGTAAGCATGAAATTAGGTGATTCAAGTAATGTGTATAATAAAATTGTTAGTGCTGCAGAACACCCTCATTTGAGCATTCCAGAAACTGAGATTGGGAAGAAAAGAAAGCAATACAATCGGCTTGTTCAGAACTCCCTTATTTTTGCTTCAGTTGGGACCGCTATGGCAGTTGTTGGTTTGGCAGCATGCCGTGCATATGCAGTGAAGAAGAAATCTTCTGCTTAG 1914 0.4289 MTDRNTVRVVVAGDRGTGKSSLIAAIASESFPDTVLPVLPPTLLPADYFPDYVPLTVIDTSSSLEKQNKRNEDLKGADVVILTYACNDSQSFSRLSSYWFRELQKLEVRVPVIVVGCKLDLRDESQQVSLERLMAQLLQEFKNVATCIECSAATLYQVPEVFYFAQRAVLHPVEPLFDHESQALTDQCVRALRRIFVLCDRDMDDALNDAELSDFQVRCFNEPLQLSQIADVKTVVQQDVPEGINSHGLTFPGFMHIHNMFLRKGHPETSWAVLRNFGYDNDLKLKDDFLPVPSKTAPDQSVELTGEAVEFLNGIFRLLDTDKDRALKPAEVDKLFCTAPESPWNDAPYNDVTERTDMGYISLNGFLSQWALMTLLDPPCSLANLIYIGYSGNPAAALRVTRRRSVDRKRKATERNVFQCYVFGSKNAGKSALLDALLGRPFSNNYTPTTGEKFAANAIELIGGTRKTLVLREIPESEVSKFLSNQDYLAACDVAVFVYDSSDEFSWKKSRDLLEKVAGQGDLTGYRVPCLLIAAKDDLTPYPRAVQDSVKVTQELGIEAPIHVSMKLGDSSNVYNKIVSAAEHPHLSIPETEIGKKRKQYNRLVQNSLIFASVGTAMAVVGLAACRAYAVKKKSSA* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3741 637 SMART rab_sub_5 7 172 - -
Mal3g3741 637 ProSiteProfiles small GTPase Rab1 family profile. 413 626 - -
Mal3g3741 637 SMART ras_sub_4 4 172 - -
Mal3g3741 637 Pfam Ras family 422 547 IPR001806 GO:0003924|GO:0005525
Mal3g3741 637 Pfam Ras family 8 169 IPR001806 GO:0003924|GO:0005525
Mal3g3741 637 PANTHER RHO FAMILY GTPASE 4 488 IPR003578 GO:0005525|GO:0007264
Mal3g3741 637 ProSiteProfiles small GTPase Rab1 family profile. 1 199 - -
Mal3g3741 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 204 IPR027417 -
Mal3g3741 637 Gene3D - 179 283 - -
Mal3g3741 637 Gene3D - 482 582 IPR027417 -
Mal3g3741 637 Gene3D - 285 475 - -
Mal3g3741 637 Pfam EF hand associated 222 306 IPR013567 -
Mal3g3741 637 ProSiteProfiles Miro domain profile. 415 584 IPR020860 GO:0003924|GO:0005525
Mal3g3741 637 ProSitePatterns EF-hand calcium-binding domain. 200 212 IPR018247 -
Mal3g3741 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 588 IPR027417 -
Mal3g3741 637 Gene3D - 3 174 IPR027417 -
Mal3g3741 637 ProSiteProfiles Miro domain profile. 4 171 IPR020860 GO:0003924|GO:0005525
Mal3g3741 637 SMART rho_sub_3 9 172 IPR001806 GO:0003924|GO:0005525
Mal3g3741 637 Pfam EF hand associated 344 411 IPR013566 -
Mal3g3741 637 PANTHER MITOCHONDRIAL RHO GTPASE 4 488 - -
Mal3g3741 637 PRINTS Transforming protein P21 ras signature 7 28 - -
Mal3g3741 637 PRINTS Transforming protein P21 ras signature 147 169 - -
Mal3g3741 637 PRINTS Transforming protein P21 ras signature 108 121 - -
Mal3g3741 637 CDD Miro2 414 596 - -
Mal3g3741 637 SUPERFAMILY EF-hand 175 371 IPR011992 -
Mal3g3741 637 PIRSF Miro 3 637 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0007005|GO:0031307
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3741 Mal-Chr3 114824714 114836922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3741 4 635 EF-hand Containing Proteins AT3G63150 58.228 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3741 K07870 - gmx:100803790 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3741 3 114824714 114836922 Mal1g2341 1 31188663 31196083 PCT