Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3735 ATGGAAGCAACTGCAACGCGATTCTCCTTCTATCACTTCCATCCCCACAATTTCCGACCCAAACCCAACACCATTCTCCCTAAAACCAGGATTTCCATTTTCACCAGAAATTCACCATCGCTTCACCGCAGAATTTCCGTCAACTTATCCGACCGACTCCGAAGCAATTATACGCCGCACGTTCAGACTCCGCATTTGAGTGAACAAGTTGTTCCGGAAACTTGCGGCGACGAGGATGAAGCAATTGTTGTTTCTCCTGGAACGTTAGAGTTGAAACCTAGAATGTTCAAGAATAGGTTTCTGAATTTTTTGCGTTTTGGTTCTGTTATTAATGATGCTGCTGAAACGTTTTTTAAGAGTGAGATTAGAAGGAGATTGTTTGTTACTGCTGTGTTAATTGTGATTAGTCGTGTTGGTTATTTTATTCCTCTTCCTGGATTTGATAGAAGGTTGATACCTAAAGATTATATGAGCTTTGTTTCTGGTTCATCTGTTGATGAACTTGGTGACTTCTCCTCTGAGCTGAAGCTGTCTCTTTTCCAGCTTGGAATCAGTCCTCAGATAATAGCATCCATTATTATGCAGGTATTCTGTCATGTTGTTCCTTCTCTAGTAAAGTTGCGAAAAGAGGGTTTGGATGGGCATGAGAAGATTAAGAGTTATATTTGGCGGATGTCACTGGGCTTTGCAATTATGGAAGCTCTAATAGTCTCTTGCTACTCACTTCCATACTCAATTTACGCTGCTAGTTATAGGTTCAAACATGTAATGGTGACAACTTTGTTATTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACCATATCAGAATCGGGATTTGGTCAAGGTTCATCTCTTATCATATGTGTTGGAATACTGACGGGGTATATGGAGACATTACACAAAATGCTTACTCAGCTTTCAGTGAGTGCTGTTAGTTGGTGGCCGTATGTGCTTGCAGTATTGGGTCTCTTCATCATAGTCACGATGTGGGCAGTTGTTGTAACTGAAGGTTGTAGGAAAGTAAAGCTTCAGTACTATGGTTTTAAACTTGCTTCTGCTGCAAGGAAGCAATCGCCTATTACTGAAGTGGAGCCCTATATTCCTTTCAATATAAATCCAGCAGGGATGCAGCCTGTTCTTACCACCTCTTACCTCTTGGCCTTTCCAAGCATTGTCGCTGGTTTGCTTGGGTCACCTTTTTGGGAGCATGTGAAGGAAATGTTGAATCCTGAAACTTCTGTTGGTGCTGAACCATGGGTCTACTATTCCATATATGCCTTCTTTGTCTTCCTTTTCAATATATTTGATATTGCTAACTTGCCAAAGGAAATTGCCGATTACTTGAATAAGATGGGTGCAAGAATACCAAATGTTAAGCCTGGGAAGGCTACGATAGAATACCTCTCAAAGGTTCAGGCATCCACACGATTTTGGGGGGGCCTATTGTTAAGTGTTTTGGCCACTACTTCAAGTGTCCTCGATCACTATTTACGGCGTACCAATGCTGGATTTGCTATTGGTTTTACATCAGTTCTAATTATTGTTGGTTCCATTATTGAACTTAGAAGATCGTATCAAGCATATAATGTGATGCCAGGATTAAGCAATGCTTTGAAACGCTATGGCGTATAA 1641 0.4095 MEATATRFSFYHFHPHNFRPKPNTILPKTRISIFTRNSPSLHRRISVNLSDRLRSNYTPHVQTPHLSEQVVPETCGDEDEAIVVSPGTLELKPRMFKNRFLNFLRFGSVINDAAETFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPKDYMSFVSGSSVDELGDFSSELKLSLFQLGISPQIIASIIMQVFCHVVPSLVKLRKEGLDGHEKIKSYIWRMSLGFAIMEALIVSCYSLPYSIYAASYRFKHVMVTTLLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLHKMLTQLSVSAVSWWPYVLAVLGLFIIVTMWAVVVTEGCRKVKLQYYGFKLASAARKQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVAGLLGSPFWEHVKEMLNPETSVGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSVLDHYLRRTNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPGLSNALKRYGV* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3735 546 PRINTS Preprotein translocase SecY subunit signature 253 278 - -
Mal3g3735 546 PRINTS Preprotein translocase SecY subunit signature 422 444 - -
Mal3g3735 546 PRINTS Preprotein translocase SecY subunit signature 218 241 - -
Mal3g3735 546 PRINTS Preprotein translocase SecY subunit signature 177 197 - -
Mal3g3735 546 PRINTS Preprotein translocase SecY subunit signature 377 396 - -
Mal3g3735 546 PRINTS Preprotein translocase SecY subunit signature 279 302 - -
Mal3g3735 546 PRINTS Preprotein translocase SecY subunit signature 126 144 - -
Mal3g3735 546 PRINTS Preprotein translocase SecY subunit signature 510 528 - -
Mal3g3735 546 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC 100 545 - -
Mal3g3735 546 Gene3D SecY subunit domain 109 536 IPR023201 -
Mal3g3735 546 SUPERFAMILY Preprotein translocase SecY subunit 106 531 IPR023201 -
Mal3g3735 546 Pfam SecY 178 524 IPR002208 GO:0015031|GO:0016020
Mal3g3735 546 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 100 545 IPR002208 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3735 Mal-Chr3 114779334 114785348 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3735 42 546 Miscellaneous Gene Families AT2G31530 73.870 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3735 - - gmx:100803256 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3735 3 114779334 114785348 Mal3g3735 3 114779334 114785348 ECH