Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal3g3730 | ATGAAGCTCGTTAGATTTCTCATGAAGTTGAACAACGAAACCGTCTCAATCGAGTTGAAGAATGGTACTATTGTTCATGGCACCATTACAGGTGTTGATATCAGTATGAATACACATTTGAAAACAGTTAAGCTAACTCTAAAGGGGAAAAATCCAGTTACTTTGGATCATCTCAGTGTGAGAGGCAACAACATTCGTTATTATATCCTTCCCGACAGCTTGAATCTTGAAACTTTACTTGTTGAAGAAGCTCCTAGGGTCAAGCCTAAGAAGCCAACTGCTGGAGGAAAGCCTTTGGGGCGAGGACGGGGGCGAGGACGTGGACGTGGACGCGGTCGTGGCCGTTAA | 348 | 0.4454 | MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEEAPRVKPKKPTAGGKPLGRGRGRGRGRGRGRGR* | 116 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal3g3730 | 115 | PANTHER | SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1 | 1 | 111 | - | - | |
| Mal3g3730 | 115 | SMART | Sm3 | 5 | 70 | IPR001163 | - | |
| Mal3g3730 | 115 | MobiDBLite | consensus disorder prediction | 83 | 115 | - | - | |
| Mal3g3730 | 115 | SUPERFAMILY | Sm-like ribonucleoproteins | 4 | 113 | IPR010920 | - | |
| Mal3g3730 | 115 | Gene3D | - | 1 | 49 | - | - | |
| Mal3g3730 | 115 | Gene3D | - | 50 | 82 | - | - | |
| Mal3g3730 | 115 | PANTHER | SMALL NUCLEAR RIBONUCLEOPROTEIN SM | 1 | 111 | IPR027141 | GO:0006396 | |
| Mal3g3730 | 115 | Pfam | LSM domain | 5 | 69 | IPR001163 | - | |
| Mal3g3730 | 115 | CDD | Sm_D1 | 2 | 93 | IPR034102 | GO:0000387 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal3g3730 | Mal-Chr3 | 114724394 | 114726131 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal3g3730 | K11087 | - | cpap:110814760 | 192.971 |
Event-related genes