Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3720 ATGGCAAATCTCTTGCCATCATTTTCATTCTCAGTGATTCCACTTAACCATCATAATTATGGAACCAAATGCTCTATTTTTCACACTTCCTTTATCCAAATTAAGCATCAGAACCAATTTGTTAGTCAAAATTTTCAAGATCTCATAATACCCTTTTCTCAGAATCTCACTTCAAAATTGTGTGCCACATCATCACGGTTGTCTATAGAAGAAACTGAGCAAAAAATCATTCCTTTCACACAATCAGAAGATATTAAAACATCATTGTCTTATTTGTTTAGGACAGACATAGGTGAAGGTTTGGTTAAGGTTTATGTTAAAAAGAAAAAAGATAGTTTTTTTGTTTATATTGAGGTTTCTTCTTTAGAGTTGTTAAGTAATGTTGAAGGTGAAACATTGGTGTTGTGTTGGGGTGTTTATAGGAATGATTCATCAAGTGTGGATGATGGAACAGGGATGAATGTGAGTCCTTTTGTGCAAAATTCTGTTGGGAAGTTTTCAGTTGAATTGGAATTTGATGTTGAACAAGTTCCTTTGTATTTGTCTTTTGTGTTGAGATTTTCTGGGTTGGAAATTAGAACCCATATGAAAAGGAATTTCTGTGTGCCTGTTGGTTTTCTTCGGGGTCGCCCGGATCCGTTGGGTATCTCATTTTCCCGTGATGGGTCAGTCAATTTTGCAGTTTTTTCTAGGCGTGTAGAGAATGTGGTATTATGTTTGTATGAGGATGATGATAGTGGTGTGGAGAAGCCTGCTTTGGAGATTGATCTTGATCCTTATGTCAATAGGTCAGGTGATATTTGGCATATCGCTTTTGAGAGTGCCGGGAATTTTGTGAGCTATGGTTATCGTTTCGGAGGAGCTCACAGCAATAACAATTATGCCGAGGGTGTTGTTTTGGACCCTTATGCTAGAATTGTTGGGAATTCTTTTCAGAATGGTATTGGTTCAATGAAGAATCTTGGATTTTTGAGAAAGGAACCTGTTTTTGATTGGGGTGATGATTATCATCCAAATTTAGAAATGGAGAAACTAGTGGTGTATCGGTTGAATGTGAAGCGCTTTACCGAGCATGAGTCGAGTCAACTTTCCGGTGATTTAGCTGGGAAATTTTCTGGTTTGGCTAAAAAATTGCAGCATTTTAAAGATCTGGGAGTCAATGCTGTTCTCTTGGAGCCAGTTTTCACATTTGACGAGGAAAAGGGGCCTCATTTTCCTTGTCATTTTTTCTCTCCAATGAACCTTTATGGACCTTCTGGTGATCCTGTATCTACTATAAACTCTATGAAAGAGATGGTGAAAATTATGCATGCCAATGGGGTAGAAGTTATAATGGAAGTTGTTTTCTCCAATACTGCTGAGGTTGGTGCTCTACAAGGTATTGATGATTTGTCTTACTATTATGCAAATGGTGTTGGTGGTTTGAAGGTACATAGTGCTTTGAATTGTAACTATCCTATAGTGCAAAATTTGATTTTGGATAGCCTTAGGCATTGGGTAACTGAGTTTCACATTGATGGTTTCTCTTTTGTAAATGCTTCACATTTGTTGATGGGGTTTCATGGAGAATACTTGTCTAGACCTCCCTTGGTCGAAGCAATTGCTTTCGATCCGGTACTGTGGAAAACTAAAATCATTGCAGATTGTTGGGATCCCAATGACATGGAACCAAAGGAGAGTCGCTTTCCTCATTGGATGAGATGGGCTGAAATAAATACAAGTTTCCGCAACGATGTGAGGAACTTTCTAAGAGGTGAAAGTCTTCTTAGCAACCTTGCAACAAGACTTTGCGGGAGTGGTGACATGTATTCTGATGGAAGAGGCCCTGCATTCTCTTTTAATTACATTGCCGGGAATTTCGGGCTTTCACTTGTGGACTTGGTCAGCTTCAGCAATGCTGATCTAGATGCCGAGTTGAGTTGGAATTGCGGAGAAGAAGGACCTACTAATAACACTGTTGTCCTCGAAAGACGGCTCAAACAAATCCGTAATTTCCTATTCATCTTGTTTGTGTCATTAGGAGTACCTATTTTGAACATGGGAGATGAGTGTGGTCACTCTTCTGGTGGTTCTCCTGCATATGGTGACACAAAACCCTTCAATTGGGCTGCTTTGAAAACAGGTTTTGGTAAACAAACCACACAATTCATTTCCTTTTTGACTTCCTTGAGAACGAGGCGGAGTGATCTTCTTCAGAGTAGGAGTTTCTTAAAAGAAGAAAACATTGAATGGCGTGGAACTGACATGGCTCCGCCAAGATGGGAGGATCCATCCTGCAAATTCCTAGCCATGACTTTGAAGGCTGAAAAAAAGGAGATTCAAGAGAGCGCTGTATCTTCTGATGAATTAGGGGATTTATTTATTGCTTTCAATGCAGGTGATCATCCAGAGACTGTAGTTTTACCCTTGCTTCCGGAAGGGATGTCATGGTACCGCTTAGTTGACACCGCACTTCCATTTCCTGGGTTTTTCTTGACCAATGGTGATTTTGTCCCGGAGCAAATATCAGGTTTGTCTACTTATGAAATGAAGTCTTACAGCTGCACTTTGTTTGAGGCAAATAATATCCCTAGTCCACCTCCTCATCCTATGTAA 2595 0.3965 MANLLPSFSFSVIPLNHHNYGTKCSIFHTSFIQIKHQNQFVSQNFQDLIIPFSQNLTSKLCATSSRLSIEETEQKIIPFTQSEDIKTSLSYLFRTDIGEGLVKVYVKKKKDSFFVYIEVSSLELLSNVEGETLVLCWGVYRNDSSSVDDGTGMNVSPFVQNSVGKFSVELEFDVEQVPLYLSFVLRFSGLEIRTHMKRNFCVPVGFLRGRPDPLGISFSRDGSVNFAVFSRRVENVVLCLYEDDDSGVEKPALEIDLDPYVNRSGDIWHIAFESAGNFVSYGYRFGGAHSNNNYAEGVVLDPYARIVGNSFQNGIGSMKNLGFLRKEPVFDWGDDYHPNLEMEKLVVYRLNVKRFTEHESSQLSGDLAGKFSGLAKKLQHFKDLGVNAVLLEPVFTFDEEKGPHFPCHFFSPMNLYGPSGDPVSTINSMKEMVKIMHANGVEVIMEVVFSNTAEVGALQGIDDLSYYYANGVGGLKVHSALNCNYPIVQNLILDSLRHWVTEFHIDGFSFVNASHLLMGFHGEYLSRPPLVEAIAFDPVLWKTKIIADCWDPNDMEPKESRFPHWMRWAEINTSFRNDVRNFLRGESLLSNLATRLCGSGDMYSDGRGPAFSFNYIAGNFGLSLVDLVSFSNADLDAELSWNCGEEGPTNNTVVLERRLKQIRNFLFILFVSLGVPILNMGDECGHSSGGSPAYGDTKPFNWAALKTGFGKQTTQFISFLTSLRTRRSDLLQSRSFLKEENIEWRGTDMAPPRWEDPSCKFLAMTLKAEKKEIQESAVSSDELGDLFIAFNAGDHPETVVLPLLPEGMSWYRLVDTALPFPGFFLTNGDFVPEQISGLSTYEMKSYSCTLFEANNIPSPPPHPM* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3720 864 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 213 304 IPR004193 GO:0004553|GO:0005975
Mal3g3720 864 Gene3D Immunoglobulins 201 321 IPR013783 -
Mal3g3720 864 CDD E_set_GDE_Isoamylase_N 213 349 IPR044505 -
Mal3g3720 864 PANTHER GLYCOGEN DEBRANCHING ENZYME 63 855 - -
Mal3g3720 864 SMART aamy 349 724 IPR006047 GO:0005975
Mal3g3720 864 Pfam Alpha amylase, catalytic domain 369 455 IPR006047 GO:0005975
Mal3g3720 864 SUPERFAMILY E set domains 209 338 IPR014756 -
Mal3g3720 864 CDD AmyAc_plant_IsoA 343 732 IPR044096 GO:0019156|GO:0019252
Mal3g3720 864 Gene3D - 740 858 IPR013780 -
Mal3g3720 864 PANTHER ISOAMYLASE 2, CHLOROPLASTIC 63 855 - -
Mal3g3720 864 SUPERFAMILY (Trans)glycosidases 330 729 IPR017853 -
Mal3g3720 864 SUPERFAMILY Glycosyl hydrolase domain 739 853 - -
Mal3g3720 864 Gene3D Glycosidases 326 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3720 Mal-Chr3 114618134 114620728 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3720 58 855 Glycoside Hydrolase AT1G03310 57.039 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3720 K01214 - gmx:100777953 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3720 3 114618134 114620728 Mal3g3720 3 114618134 114620728 ECH