Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3683 ATGGCTTTAGATGCAACTGCAACAACCAAGAAAGGTGGAAGGGGTAAACCCAAAACCAAATCCGTTTCAAGATCAAGCAAAGCCGGTCTTCAGTTCCCTGTTGGTCGCATCGCTCGCTTCCTCAAAGCCGGTCGTTATGCTCAGCGTGTTGGATCTGGTTCCCCTGTTTATCTCTCCGCAGTTCTCGAATACCTCGCTGCCGAGGTTTTGGAATTGGCTGGAAACGCTGCGAGGGATAACAAGAAGACAAGGATTGTACCAAGACACATTCAACTTGCTGTTAGGAATGATGAAGAATTGAGCAAGTTAATGGGACATGTGACTATTGCTAATGGTGGCGTTTTGCCTAACATTCATCAGAATTTGTTACCAAAGAAGGTTGCTGGAAAGAAAGGAGAAATTGGATCCGTTAGTCAGGAGTTTTAG 426 0.4554 MALDATATTKKGGRGKPKTKSVSRSSKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLMGHVTIANGGVLPNIHQNLLPKKVAGKKGEIGSVSQEF* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3683 141 Pfam C-terminus of histone H2A 98 131 IPR032454 -
Mal3g3683 141 Gene3D Histone, subunit A 7 134 IPR009072 GO:0046982
Mal3g3683 141 PRINTS Histone H2A signature 64 77 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mal3g3683 141 PRINTS Histone H2A signature 106 124 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mal3g3683 141 PRINTS Histone H2A signature 20 42 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mal3g3683 141 PRINTS Histone H2A signature 49 64 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mal3g3683 141 PRINTS Histone H2A signature 78 92 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mal3g3683 141 SMART h2a4 9 129 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mal3g3683 141 CDD H2A 11 126 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mal3g3683 141 MobiDBLite consensus disorder prediction 1 27 - -
Mal3g3683 141 PANTHER HISTONE H2AXA-RELATED 7 139 - -
Mal3g3683 141 Pfam Core histone H2A/H2B/H3/H4 16 95 IPR007125 GO:0003677
Mal3g3683 141 PANTHER HISTONE H2A 7 139 IPR002119 GO:0000786|GO:0003677|GO:0030527
Mal3g3683 141 ProSitePatterns Histone H2A signature. 28 34 IPR032458 -
Mal3g3683 141 SUPERFAMILY Histone-fold 23 126 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3683 Mal-Chr3 114245400 114245921 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3683 K11251 - gmx:100787899 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3683 3 114245400 114245921 Mal3g3683 3 114245400 114245921 ECH