Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3588 ATGCAGAGGCCTCCACCTGAAGATTTTCTGTTGAAAGAGACCAAACCCCACCTTGGTGGTAAGGTCTCTGGAGACAAGCTTACTAGTACTTATGATCTCGTTGAGCAAATGCAGTATCTTTATGTGAGGGTTGTGAAGGCTAAGGAACTACCTTCAAAGGATGTTACTGGTAGTTGTGACCCTTATGTTGAAGTCAAGCTTGGGAACTACAAAGGAACCACAAGGCATTTTGAGAAGAAGACTAATCCTGAATGGAATCAGGTTTTTGCTTTTTCGAAGGATCGGATTCAGGCTTCGGTTCTTGAGGTTTTTGTGAAAGATAAGGATTTAGTGAAGGATGATTTTATTGGTCGTGTTTGGTTTGATCTCAATGAGATTCCGAAGAGGGTTCCTCCGGATAGTCCTCTGGCGCCGCAGTGGTATAGGTTGGAGGATAGAAAGAGTGATAAGGCGAGAGGGGAGCTGATGCTGGCTGTTTGGATGGGTACTCAAGCTGATGAAGCGTTTCCTGAGGCGTGGCACTCGGATGCGGCGACAGTTAGTGGGACGGATGCTCTTGCAAATATTAGGTCGAAGGTGTATTTGTCTCCTAAGCTTTGGTATTTGAGGGTTAATGTAATTGAGGCACAGGACTTGCAGCCGTCTGACAAGGGGAGATTCCCGGAGGTTTATGTGAAGGCTATTCTTGGAAACCAGACCCTGAGGACTAGAATCTCTCAGAGCAGGAGTATCAATCCGATGTGGAATGAGGATTTGATGTTTGTGGCTGCGGAACCGTTTGAGGAGCCGTTGATTTTGAGCGTGGAAGATAGGGTTGCCCCTAACAAAGAGGAACTGCTAGGGAAGTGTGTTATTCCTTTACAGATGATGGACCGGAGACTCGATCACAAACCTGTGAACACTAGGTGGTTTAATATTGAAAAGCATGTTGTTATTATGGAAGGGGACAAGAAGAAGGAAATCAAGTTTGCAAGCAGGATTCATATGAGGGTCTGTCTTGAAGGTGGTTATCATGTTTTGGATGAATCAACTCACTACAGCAGTGATCTTCGCCCAACTGCAAAACAGCTCTGGAAGTCAAGTATTGGAGTTCTTGAAGTGGGGATTTTGAATGCTTCGGGTTTGGTGCCGATGAAATCAAATAATGGGAGGGGGACAACCGATGCTTATTGTGTAGCAAAGTATGGACAGAAATGGGTGCGGACGAGGACCATCATCGATAGCTTTGCACCGAGGTGGAATGAGCAGTATACTTGGGAGGTTTTTGATCCGTGCACTGTTATTACAATTGGTGTATTCGATAACTGTCACTTGCATCATGGTGGTGATAAGCCTGGAGGACAAAGAGATTCAAAAATCGGCAAGGTACGAATCCGTCTCTCCACTCTTGAGACTGATCGAGTCTACACACATTCCTATCCGCTTCTAGTTCTTCATCCAACTGGGGTGAAGAAAATGGGTGAAATTCAATTGGCTGTAAGGTTTACTTGCTCCTCCTTGCTTAACATGATGCACATGTATTCAAATCCATTGTTGCCTAAGATGCATTACATTCATCCATTAACCGTAAGCCAGCTCGACAGTCTGAGGCATCAAGCCACTCAGATTGTTTCAATGAGACTGAGCCGTGCTGAGCCGCCACTGAGAAAGGAAGTAGTTGAATATATGCTGGATGTAGGTTCCCACATGTGGAGCATGAGAAGAAGCAAAGCCAACTTTTTCAGAATCATGGGAGTTTTGAGTGGATTAATTGCTGTTGGAAAATGGTTTGACCAAATCTGCAATTGGAAAAACCCTATCACAACAGTTCTTATTCATATCCTGTTTATAATACTTGTTATGTACCCTGAACTGATCTTACCAACAATTTTTCTTTACCTCTTTTTGATTGGAGTTTGGTACTATAGATGGAGGCCAAGGCACCCACCTCACATGGACACACGTCTCTCCCATGCAGATTCCGCACACCCTGACGAACTAGATGAAGAGTTCGACACATTCCCAACTACAAGACCTTCTGACATCGTAAGAATGCGATACGATCGTCTTAGAAGTATTGCCGGGAGGATACAGACTGTTGTCGGCGATCTGGCCACTCAAGGTGAAAGGCTGCAGTCTTTGCTGAGCTGGAGGGATCCAAGAGCTACTGCACTGTTTGTACTCTTCTGTTTGATTGCTGCTATTGTTCTCTATGTGACTCCATTTCAAGTTGTGGCTCTTCTCAGTGGAATCTATGTGTTGAGACATCCAAGGTTTCGTCACAAGCTTCCTTCAGTTCCACTCAATTTCTTCAGAAGGCTGCCTGCAAGAACTGATTGCATGCTTTGA 2328 0.4476 MQRPPPEDFLLKETKPHLGGKVSGDKLTSTYDLVEQMQYLYVRVVKAKELPSKDVTGSCDPYVEVKLGNYKGTTRHFEKKTNPEWNQVFAFSKDRIQASVLEVFVKDKDLVKDDFIGRVWFDLNEIPKRVPPDSPLAPQWYRLEDRKSDKARGELMLAVWMGTQADEAFPEAWHSDAATVSGTDALANIRSKVYLSPKLWYLRVNVIEAQDLQPSDKGRFPEVYVKAILGNQTLRTRISQSRSINPMWNEDLMFVAAEPFEEPLILSVEDRVAPNKEELLGKCVIPLQMMDRRLDHKPVNTRWFNIEKHVVIMEGDKKKEIKFASRIHMRVCLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLEVGILNASGLVPMKSNNGRGTTDAYCVAKYGQKWVRTRTIIDSFAPRWNEQYTWEVFDPCTVITIGVFDNCHLHHGGDKPGGQRDSKIGKVRIRLSTLETDRVYTHSYPLLVLHPTGVKKMGEIQLAVRFTCSSLLNMMHMYSNPLLPKMHYIHPLTVSQLDSLRHQATQIVSMRLSRAEPPLRKEVVEYMLDVGSHMWSMRRSKANFFRIMGVLSGLIAVGKWFDQICNWKNPITTVLIHILFIILVMYPELILPTIFLYLFLIGVWYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTTRPSDIVRMRYDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVLFCLIAAIVLYVTPFQVVALLSGIYVLRHPRFRHKLPSVPLNFFRRLPARTDCML* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3588 775 Pfam C2 domain 39 132 IPR000008 -
Mal3g3588 775 Pfam C2 domain 363 475 IPR000008 -
Mal3g3588 775 Pfam C2 domain 200 306 IPR000008 -
Mal3g3588 775 Gene3D C2 domain 38 160 IPR035892 -
Mal3g3588 775 PANTHER PROTEIN QUIRKY-LIKE 1 775 - -
Mal3g3588 775 Pfam Plant phosphoribosyltransferase C-terminal 620 775 IPR013583 -
Mal3g3588 775 Gene3D C2 domain 187 332 IPR035892 -
Mal3g3588 775 SMART C2_3c 201 299 IPR000008 -
Mal3g3588 775 SMART C2_3c 39 135 IPR000008 -
Mal3g3588 775 SMART C2_3c 364 472 IPR000008 -
Mal3g3588 775 CDD C2D_MCTP_PRT_plant 364 492 - -
Mal3g3588 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 354 IPR035892 -
Mal3g3588 775 ProSiteProfiles C2 domain profile. 346 473 IPR000008 -
Mal3g3588 775 ProSiteProfiles C2 domain profile. 180 304 IPR000008 -
Mal3g3588 775 CDD C2C_MCTP_PRT_plant 201 352 - -
Mal3g3588 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 39 176 IPR035892 -
Mal3g3588 775 ProSiteProfiles C2 domain profile. 21 141 IPR000008 -
Mal3g3588 775 CDD C2B_MCTP_PRT_plant 39 163 - -
Mal3g3588 775 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 504 IPR035892 -
Mal3g3588 775 Gene3D C2 domain 361 499 IPR035892 -
Mal3g3588 775 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 1 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3588 Mal-Chr3 113107407 113109734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3588 1 775 Lipid Metabolism Gene Families AT3G57880 89.820 0.0 1467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3588 - - gmx:100818371 1494.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3588 3 113107407 113109734 Mal3g3588 3 113107407 113109734 ECH
Mal3g3588 3 113107407 113109734 Mal1g3678 1 69887882 69890206 PCT