Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3569 ATGAAAAAACCACCCCCACTCTTCTTCATCTTCGAAATCATCTTATTCCTTCTCATCCAATCACATCTCGCCACATCACACACTCCAAATCCCACCACCGTCACATTCTCCGTCACCGAATACGGAGCAACCGGCGACGGCATCCACTACGACACCGTATCAATCCAAACCGCCATTGACTCCTGCCCTTACTCCATCCCCTGCCGCGTCACCTTCCCATCTCCCGGTAACTACCTAACCGCAACCGTCTTCCTTCGATCCGGCGTCGTCCTCAACGTCGAACCCGGCGCCACCATCCTCGGCGGACCCAGGCTGGAAGATTACCCGAAGGAATCTTCGAGATGGTATGTTGTGTTGGCGGAGAACGCGACGGATGTGGGGATTGAAGGTGGTGGTGTGGTGGATGGACAGGCGGAGAAATTTGTGGTGAGGTATAATGAGAGGAAGAATGTGATGGTGAGCTGGAATGAGACTGGGAGTTGTTTGGGTGATGAATGTAGACCTAGATTAATTGGTTTTCTTGGTTGCAAGAATGTTAGAGTCTTCAATGTTACTCTTAATCAACCTGCTTATTGGTGCTTACACTTGGTGAGAAGTGAGAACATAACCATTCAGGATATTGCAATTTATGGAGATTTGAATATACCAAACAACGATGGGATTGACATTGAGGACTCAAACAATACGGTAATCACTCGATGCCACATTGATACAGGGGATGATGCAATCTGTCCAAAATCATCCACTGGTCCTGTTTACAACTTAACTGTCACTAACAGTTGGATTCGATCCAAATCTTCTGCAATCAAATTTGGCAGTGCTAGCTGGTTTGAATTCAAGCATTTTGTCTTTGACAATATCACTATTGTTGATTCTCATAGAGGGCTTGCATTCCAGATTCGTGATGGAGGAAATGTAAGTGACATTGTCTTCTCAAACATAAATATAAGCACAAGATACTATGATCCATTATGGTGGGGGAGAGCAGAGCCTATCTATGTCACAACTTGCCCAAGAGACTCAACCTCAAAGGAGGCTTCAATCTCAAATGTTCGTTTCATCAACATCACAGCAAATTCTGAAAATGGAATCTTCCTCTCTGGTTCAAAGAGAGGATTGTTGAGAAACTTGAGCTTCATCAACATGAATATCACTTATAGAAGGTTCACCAGTTATGCTGGTGGTTTGTTTGACTATAGACCAGGATGCCAAGAATTGGTTAAACATAAGACTGCAGGGATAATGATGGAGCACATTGAAGGTCTTGAGGTTAGAAATGTAGAAATGAGATGGGAAAATAATGAACTTGAGCAGTGGAATAATCCTATGGAGTTCAAACCATCTACTGTGAATAAAATTCATTTCTTTAATTTTAACTCTGTTGTGTATTCAAATAGCAAATCAAGTCAATAA 1413 0.4303 MKKPPPLFFIFEIILFLLIQSHLATSHTPNPTTVTFSVTEYGATGDGIHYDTVSIQTAIDSCPYSIPCRVTFPSPGNYLTATVFLRSGVVLNVEPGATILGGPRLEDYPKESSRWYVVLAENATDVGIEGGGVVDGQAEKFVVRYNERKNVMVSWNETGSCLGDECRPRLIGFLGCKNVRVFNVTLNQPAYWCLHLVRSENITIQDIAIYGDLNIPNNDGIDIEDSNNTVITRCHIDTGDDAICPKSSTGPVYNLTVTNSWIRSKSSAIKFGSASWFEFKHFVFDNITIVDSHRGLAFQIRDGGNVSDIVFSNINISTRYYDPLWWGRAEPIYVTTCPRDSTSKEASISNVRFINITANSENGIFLSGSKRGLLRNLSFINMNITYRRFTSYAGGLFDYRPGCQELVKHKTAGIMMEHIEGLEVRNVEMRWENNELEQWNNPMEFKPSTVNKIHFFNFNSVVYSNSKSSQ* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3569 470 PANTHER PECTIN LYASE-RELATED 22 462 - -
Mal3g3569 470 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 22 462 - -
Mal3g3569 470 Pfam Glycosyl hydrolases family 28 115 386 IPR000743 GO:0004650|GO:0005975
Mal3g3569 470 SUPERFAMILY Pectin lyase-like 18 384 IPR011050 -
Mal3g3569 470 Gene3D - 16 394 IPR012334 -
Mal3g3569 470 SMART pbh1 343 368 IPR006626 -
Mal3g3569 470 SMART pbh1 306 328 IPR006626 -
Mal3g3569 470 SMART pbh1 199 225 IPR006626 -
Mal3g3569 470 SMART pbh1 226 247 IPR006626 -
Mal3g3569 470 SMART pbh1 252 273 IPR006626 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3569 33 464 Glycoside Hydrolase AT3G57790 66.290 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3569 - - mtr:MTR_7g092470 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3569 3 112902390 112905654 Mal3g3569 3 112902390 112905654 ECH