Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3520 ATGTGGGTGTGTATCTCTGATGATTTTGACATTAGGCAGATAATAATAAAAATCATCAACTCTGCTTCAGCTTCAACTTCCATACTTGATATTCCTCCTCACCAAGAGAACATTAACAACTTAGATATTGAGCAGTTACAAAGTCGTCTTCGACATAAGCTTTCCAATCAAAAGTTTTTGCTTGTATTGGACGATATATGGAACAATGATCGTGCGAAATGGATTAAACTAATAAACTTGTTAAAAGGTGGTGCAATAGGAAGCAAAATCATAGCGACAACACGTAGTAATTCAATTGCTTCAATGATTGGTACTTTCCCCTCTTATGTTTTAGAAGGTCTTTCTCTAGAACATTGTTTATCTTTGTTTGTTAAATGGGCATTTAAGGAAGGCGAAGAAGAAAAATATCCAAATCTAGTGACGATCGGAAAAGAAATTGTGAAAAAATGCCATGGAGTTCCACTAGCAGTGAGAACATTAGGAAGTTCATTGTTCTCAAAATTTGATTTAAATAAGTGGATATTTGTTAGAGACTCTAAGATGTGGAATTTAATACAAAACAAAGATGACATTTTACCTGCGCTTAAGTTAAGCTATGATCAAATGCCATCCCATTTGAGGCATTGTTTCACATACTTTTCCCTTTATCCAAAAGATTTTGGTTTCACTAGTGTTCAAATCACTAAACTCTGGGTGGCACTAGGATTACTGCAATCACAAGATGGAAATCAATGGCCTGAGAATATTGCAAGAGATTATATTGATGAGTTACATTCAAGGTCATTTCTTCAAGATTTTGAGGACTTTGGCCACTTCTACTATTTCAAAGTACACGATTTGGTGCATGATCTTGCATTGTATGTTGCAAAAGATGATTGTGTAGTAGTAGACTCCCATACTCGGAATATATCTCAACAAGTGAGGAATTTCTCTATTGTAGAAAATGGATCACTTGACAGTGCTTTGTTCCCTAAGTCCAGGAGTGTGAGAGCTATATTATTTCCGATCGAAGGAGTGGGTCTTGACAGTGAAATTATATTGGACACGTGGGTATCAAGATACAAATACTTAAGAGTTTTAGATTTAAGTGATTCTTCATTGGAGACTCTTCCCAATTCAATTGCTAAATTGGAGCACCTGCGTGTTCTCAACCTTTCTAATAACCACAAAATCAAAAGACTTCCACATTCAATTTGCAAATTCCGAAGTTTGCAAGTTTTGTCACTCAGCGGTTGCATGAATCTTGAAACATTGCCTAGAGAATTAGGTAAACTAATCAGCCTTCGGCAATTGTATATAACCACAAAGCAATCTGTTCTGTCACTAATTGAATTTTCAAGCTTGAGCAATCTTCAAACTTTGAGTTTTGAATATTGTGACAATTTGGTGGAGGTTGTGCTCGGAGAGGTACAACTTGTTTCCCTAGAAACATTGATTGTTCGTTCTTGTGGAAGCCTTAGATCATTACCTCTTTGTAGTCTCTCTGAGTTAGAGGCTCTGTTAGTCGTAGACTGTGTGAACCTAGAGCTCACACTGCCAGAGAATCTTCAAAACTCGATGAAAACATGGAGGATGCGTTTTCTTCATCTTGAGAATTTTCCGCATCTACATACATTTCCTGAATGGATTGAAGTAGCAGCAGAGACTTTACAAACCTTGATAATTATAAATATGCCCATGCTTTGGCCGCTTCCCGGGTGTTTGACAAGAATGTCTAATCTTAAAATGCTCCATATTGCTGACTGTTACTTTTTTTATTCTCTTCCAAGTGGCATGCAACGCCTCACTGCCCTTGAATCTTTGACCATAGATGGTTGTCCTGAACTATGTCGAAAATGTCAGCCACATTCTGGTGAATACTGGCCCATGATTTCTCACATTAAACGTGTTTCCATTGGAGAACCAGAAAAAGAGGAGCCTCATAAGGCAGCAGAGGGATCGCTCATTTGCAACGATGATGATATACTGTACGTAAAAACATTACTATTTGTTTGA 1995 0.3724 MWVCISDDFDIRQIIIKIINSASASTSILDIPPHQENINNLDIEQLQSRLRHKLSNQKFLLVLDDIWNNDRAKWIKLINLLKGGAIGSKIIATTRSNSIASMIGTFPSYVLEGLSLEHCLSLFVKWAFKEGEEEKYPNLVTIGKEIVKKCHGVPLAVRTLGSSLFSKFDLNKWIFVRDSKMWNLIQNKDDILPALKLSYDQMPSHLRHCFTYFSLYPKDFGFTSVQITKLWVALGLLQSQDGNQWPENIARDYIDELHSRSFLQDFEDFGHFYYFKVHDLVHDLALYVAKDDCVVVDSHTRNISQQVRNFSIVENGSLDSALFPKSRSVRAILFPIEGVGLDSEIILDTWVSRYKYLRVLDLSDSSLETLPNSIAKLEHLRVLNLSNNHKIKRLPHSICKFRSLQVLSLSGCMNLETLPRELGKLISLRQLYITTKQSVLSLIEFSSLSNLQTLSFEYCDNLVEVVLGEVQLVSLETLIVRSCGSLRSLPLCSLSELEALLVVDCVNLELTLPENLQNSMKTWRMRFLHLENFPHLHTFPEWIEVAAETLQTLIIINMPMLWPLPGCLTRMSNLKMLHIADCYFFYSLPSGMQRLTALESLTIDGCPELCRKCQPHSGEYWPMISHIKRVSIGEPEKEEPHKAAEGSLICNDDDILYVKTLLFV* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3520 664 PRINTS Disease resistance protein signature 150 164 - -
Mal3g3520 664 PRINTS Disease resistance protein signature 53 67 - -
Mal3g3520 664 PRINTS Disease resistance protein signature 375 391 - -
Mal3g3520 664 PANTHER DISEASE RESISTANCE PROTEIN RP 1 526 IPR044974 GO:0006952
Mal3g3520 664 Gene3D - 198 287 IPR036388 -
Mal3g3520 664 Gene3D Ribonuclease Inhibitor 308 628 IPR032675 -
Mal3g3520 664 Pfam Leucine rich repeat 356 412 IPR001611 GO:0005515
Mal3g3520 664 SUPERFAMILY L domain-like 276 634 - -
Mal3g3520 664 Gene3D - 113 197 IPR042197 -
Mal3g3520 664 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 1 526 - -
Mal3g3520 664 Pfam NB-ARC domain 1 200 IPR002182 GO:0043531
Mal3g3520 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 212 IPR027417 -
Mal3g3520 664 Gene3D - 1 106 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3520 Mal-Chr3 112372085 112374079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3520 351 592 Miscellaneous Gene Families AT3G53240 24.514 3.40e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3520 - - gmx:100794422 829.32