LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal3g3517	ATGGCGTGCAATGGCGCCGGCGGTTGTCAATCCGGTGGTTGCTACAAAGACGAAGAAACGACCTGCGACAAACCAACTGCGTCTTCAGAAACTGATTCAAGAAGCTCTAGCACTCTCTGCCTCAAGTGCAAGCTAAACGACGTCGTTTCCGGCTACGGCGGAATCGACGATGGTCGTTTCTGTGCAGATTGCTTCAGGAGCAACTTGTTCGGGAAGTTTCGACTCGCCGTCACATCAAACGCCATGATCTCTCCCACCGATAAGGTCCTCGTTGCCTTCTCTGGTGGCCCTTCTTCCAGGGTGGCTTTGCAATTTGTGCATGATATGCAAGAGAGGGCTCATAAGAACTTTGAAGCTAGTAGAGATAGGTCATTGCCTGTGTTTGGTGTTGGAGTTGTGTTTATTGATGAGAGTGCTGTTTTGCCGATTCCGTCAAATGAAATGGAAGAGGCAGTAGAAGTTATTAGTTTGATTGTTTCGAGTTTAGCCCCGCCTAGAAAGGAGTTGCATTTTGTTCCTATTGAGACTGTTTACTCATCGGATTCTAGTGATGGGAAGGGGAAGTTAATTGAGCTGATGAATGTAGTGAGTGATCCTACTGGTAGGGAGGATATGTTGCTTTCTCTGCGCATGTTGGCCTTGCAAAAGGTGGCTTCTGAATTTGGGTATAACAGGATTGTTTTAGGCTCGTGCATTTCAAGGATTGCTGCTCATGTCATTACTGCCACTGTGAAGGGTCAAGGATATTCATTACCTGCTGATATACAGTATGTTGACGCTAGATGGGAAATTCCAGTTGTGCTTCCTCTGCGTGATTGTTTTGCCCAAGAGATCAACATGTTTTGCCGTCTTGACAGTCTAAAGACTATTAAACTGTCTACAGGTCCCAGTTCTAGCATTAATAGCTTGGTCTCATCTTTTGTGGCTTTATTGCAGGAAGAGAACCCATCTCGAGAGAGCACAATTGTAAGAACAGCCGGGAAACTTATTCCCTTTCAATTTAACAGGATTCCTGAGATCATTGATGGTAATGTTCCGTTGGCAACTCGAAGACGCCAAAAGAGATACAATCTCAAATCCAATGAATCTGTTTCCTCAGAATCTTTCTGTCCTCTCTGCAATAGCCCACTTGACAAAAGTGAGATTGTTGATTGGAGCAATCACAATAACTGCAAAAGTAGTGACACTTTTTATACTTCTTGCTGTTCAAGTTGTCAGTTTCAGATACTTCCACCAGATTCTGCATCGATGGACAAATTTTATACGGATTTGCCTCATTCAGTGGTTGCCCGGACAAGCCCAGTCAACATTGGTAATTTGAATGCGCTAAGGGAACAAATACAAGATTGCTTGCTTTCAGATGGTGAAGATGAAACTTAA	1380	0.4413	MACNGAGGCQSGGCYKDEETTCDKPTASSETDSRSSSTLCLKCKLNDVVSGYGGIDDGRFCADCFRSNLFGKFRLAVTSNAMISPTDKVLVAFSGGPSSRVALQFVHDMQERAHKNFEASRDRSLPVFGVGVVFIDESAVLPIPSNEMEEAVEVISLIVSSLAPPRKELHFVPIETVYSSDSSDGKGKLIELMNVVSDPTGREDMLLSLRMLALQKVASEFGYNRIVLGSCISRIAAHVITATVKGQGYSLPADIQYVDARWEIPVVLPLRDCFAQEINMFCRLDSLKTIKLSTGPSSSINSLVSSFVALLQEENPSRESTIVRTAGKLIPFQFNRIPEIIDGNVPLATRRRQKRYNLKSNESVSSESFCPLCNSPLDKSEIVDWSNHNNCKSSDTFYTSCCSSCQFQILPPDSASMDKFYTDLPHSVVARTSPVNIGNLNALREQIQDCLLSDGEDET*	460

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal3g3517	459	Gene3D	HUPs	39	405	IPR014729	-
	Mal3g3517	459	Hamap	Cytoplasmic tRNA 2-thiolation protein 2 [CTU2].	34	413	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Mal3g3517	459	Pfam	Cytoplasmic tRNA 2-thiolation protein 2	299	392	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Mal3g3517	459	PANTHER	CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2	27	453	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Mal3g3517	459	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	63	290	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal3g3517	K14169		-	gmx:100804325	766.533

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal3g3517	3	112354856	112359112	Mal3g3517	3	112354856	112359112	ECH