Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3511 ATGCTCCAGAGTGCCATTCCCCCCATTTCAATTGCCACCACCACATCACCTCACTGCATCCAACTCAGCGCCGAGTCAACTCGTCCACCAAAATCCACAACCACACGCAAGAAAAGCTCCAAAGAGTTAGCATTCAAGGAGAAGAAGGATGGTTTTGTCGACTACGACAGAGGACACCATGAAGTCTCCACCAAAATCTCCGGCCTCCGCAAGGAAGATATCCCCGCTCACTGCCGCCTCCGTGTCGCCGGTAACCGCTTCCAAAAGGATTGGACCGTGTCCGAGGTCGCTGACTCCGTCCTCTCCCTCACTCTCAGTGAAGACATTGAAGGCCTGCTCAATCGTTGGATTGGTCGATTCGCACGCAAGAATTTCCCTTTTCTCATTAGGGAGTTGACACAAAGAGGTTCAATTGAACACTGTAACTTAGTTTTCAGCTGGATGAAGAATCAGAAGAATTATTGTGCTAGAACAGATATATACAACATGATGATTAGGTTGCAAGCTAGGCATAATAGAACGGATCAGGCACGTGGGTTGTTTTTCGAGATGCAAAAATGCAGGTGTAAACCTGATGCTGAGACATACAATGCTCTTATTAATGCGCATGGTCGAGCTGGAAAATGGCGTTGGGCTATGAATATCATGGATGACATGCTGCGTGCAGCTATTCCACCAAGTCGGTCAACTTACAACAACTTGATTAATGCCTGTGGATCTAGTGGAAATTGGAAAGAAGCACTTAATATTTGCAAGAAAATGACTGACAATGGAGTTGGGCCTGATCTTGTCACTCACAATATTATGTTATCTGCATTTAAAAGTGGGGCTCAGTATTCAAAAGCTTTGTCGTATTTTGAACTAATGAAGGGAACTCATATTCGCCCAGATACAACCACATTTAATATCATTATCCATTGTCTAGTGAAGCTTAAACAATATGACAAAGCCATTGATATTTTTAATTCCATGAGGGAAAAGAAGTCAGAATGTCACCCTGACGTTGTAACATTCACTAGTATCATTTATTTGTATTCTGTGTGTGGGCAAATTGAAAATTGTGAGGCTGCATTCAATATGATGCTTGCAGAAGGGTTGAAACCAAATATAATCTCATACAATGCACTACTAGGTGCATATGCTGCTCGCGGGATGGAAAATGAGGCACTTCAGGTTTTTAATGAGATAAAACAAAATGGTTTCCGTCCAGATATTGTATCTTATACATCTCTACTTAATGCTTATGGAAGATCACGAAAGCCCCAAAAAGCAAGGGAAATATTCAAAATGATAAAGAGAAACAACTTGAAGCCAAACATTGTCAGTTACAATGCACTGATTGATGCCTATGGGTCTAATGGTTTGCTTGAAGATGCAATTGAAATCTTGCGAGAAATGGAACAAGATAAGATTCATCCAAATGTTGTCTCAATATGCACACTCTTGGCTGCCTGTGGGCGGTGTTGTCAAAAGGTGAAGATTGATACTGTGCTATCAGCAGCTGAGATGCGAGGCATTAAATTGAACACAGTTGCATATAATTCAGCTATAGGAAGCTATATTAATGTGGGGGAGTATGAGAAAGCTATAGACTTGTATAAAACTATGGGGAATAAAAAAATAAAATCCGATACTGTTACTTACACTATCTTGATAAGTGGTTGTTGTAAGATGTCAAAATTTGGGGAAGCCCTATCTTTTATGGAAGAAATGATGCATCTAAAACTTCCTATGTCCAAAGAGGTCTACTCATCTGTCATATGTGCCTATAGCAAACAGGGTAAAATCATAGAAGCAGAGTCTACATTCAACTTGATGAAATCATCGGGTTGCAGTCCAGATGTGGTTTCATATACTGCAATGCTTGATGCCTACAATGCAGCGGAGAAGTGGGAGAAAGCATATGCACTCTTTGAAGAAATGGAAGAAAATGACGTCAAGCTAGATACCATTGCATGTGCAGCTTTAATGAGAGCTTTTAACAATGGTGGCCAACCAGGAAGGGTCCTTAGTCTTGCAGAAAGTATGAGAGAAAAAGACATTCCTTTAAGCGATACCATATTTTTTGAAATGGTATCTGCCTGTAGCTTATTACATGATTGGAAGACAGCTGTTGATGTGATCAAGTACATGGAGCCCTCACTTCATGTAATTTCATCTGGATGTTTAAATCTGTTCCTTAATTCTTTAGGAAAAAGTGGAAAGATTGAAACTATGTTGAAGCTATTCTTCAAAATGTTGGCATCGGGTGCTGAAGTTAACTTCAATACTTATTCTATTTTATTGAAAAACCTTTTATCATCTGGAAATTGGAGGAAGTATTTAGAGGTACTACAATGGATGGAGGATGCAGGAATTCATCCCTCAAATGAAATGTACCGTGACATATCCTCCTTTTCACTAAAATGTTGTGGGGCTGAAAATGCTGCTGTCATAAAAGAAAGGCTTGAATCCTTGAAAAGAAAACCCGAGGATCAAATTTCTGCAAGCCAACCTTGTGAATCTCATGTTTAG 2514 0.4018 MLQSAIPPISIATTTSPHCIQLSAESTRPPKSTTTRKKSSKELAFKEKKDGFVDYDRGHHEVSTKISGLRKEDIPAHCRLRVAGNRFQKDWTVSEVADSVLSLTLSEDIEGLLNRWIGRFARKNFPFLIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRLQARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGKWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNICKKMTDNGVGPDLVTHNIMLSAFKSGAQYSKALSYFELMKGTHIRPDTTTFNIIIHCLVKLKQYDKAIDIFNSMREKKSECHPDVVTFTSIIYLYSVCGQIENCEAAFNMMLAEGLKPNIISYNALLGAYAARGMENEALQVFNEIKQNGFRPDIVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCCQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYEKAIDLYKTMGNKKIKSDTVTYTILISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSVICAYSKQGKIIEAESTFNLMKSSGCSPDVVSYTAMLDAYNAAEKWEKAYALFEEMEENDVKLDTIACAALMRAFNNGGQPGRVLSLAESMREKDIPLSDTIFFEMVSACSLLHDWKTAVDVIKYMEPSLHVISSGCLNLFLNSLGKSGKIETMLKLFFKMLASGAEVNFNTYSILLKNLLSSGNWRKYLEVLQWMEDAGIHPSNEMYRDISSFSLKCCGAENAAVIKERLESLKRKPEDQISASQPCESHV* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3511 837 SUPERFAMILY TPR-like 298 640 IPR011990 GO:0005515
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 579 613 IPR002885 -
Mal3g3511 837 Pfam PPR repeat 160 189 IPR002885 -
Mal3g3511 837 Pfam PPR repeat 264 290 IPR002885 -
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 192 226 IPR002885 -
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 509 543 IPR002885 -
Mal3g3511 837 Gene3D Tetratricopeptide repeat domain 99 239 IPR011990 GO:0005515
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 439 473 IPR002885 -
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 369 403 IPR002885 -
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 754 788 IPR002885 -
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 544 578 IPR002885 -
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 297 331 IPR002885 -
Mal3g3511 837 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 32 797 - -
Mal3g3511 837 Gene3D Tetratricopeptide repeat domain 663 834 IPR011990 GO:0005515
Mal3g3511 837 Pfam PPR repeat family 195 238 IPR002885 -
Mal3g3511 837 Pfam PPR repeat family 296 342 IPR002885 -
Mal3g3511 837 Pfam PPR repeat family 509 557 IPR002885 -
Mal3g3511 837 Pfam PPR repeat family 582 625 IPR002885 -
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 404 438 IPR002885 -
Mal3g3511 837 SUPERFAMILY TPR-like 191 362 IPR011990 GO:0005515
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 227 261 IPR002885 -
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 334 368 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 336 370 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 195 227 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 230 262 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 300 329 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 441 475 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 264 298 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 160 193 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 616 650 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 546 576 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 511 544 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 724 754 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 582 615 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 371 405 IPR002885 -
Mal3g3511 837 TIGRFAM PPR: pentatricopeptide repeat domain 406 440 IPR002885 -
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 614 648 IPR002885 -
Mal3g3511 837 PANTHER OS07G0213300 PROTEIN 32 797 - -
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 262 296 IPR002885 -
Mal3g3511 837 Gene3D Tetratricopeptide repeat domain 327 397 IPR011990 GO:0005515
Mal3g3511 837 Gene3D Tetratricopeptide repeat domain 575 648 IPR011990 GO:0005515
Mal3g3511 837 Gene3D Tetratricopeptide repeat domain 250 326 IPR011990 GO:0005515
Mal3g3511 837 Gene3D Tetratricopeptide repeat domain 469 574 IPR011990 GO:0005515
Mal3g3511 837 Gene3D Tetratricopeptide repeat domain 398 468 IPR011990 GO:0005515
Mal3g3511 837 Pfam Pentatricopeptide repeat domain 637 681 IPR002885 -
Mal3g3511 837 Pfam Pentatricopeptide repeat domain 392 453 IPR002885 -
Mal3g3511 837 Pfam Pentatricopeptide repeat domain 742 792 IPR002885 -
Mal3g3511 837 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 157 191 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3511 Mal-Chr3 112262162 112269285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3511 441 818 Glycosyltransferase AT1G05670 22.955 4.69e-19 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3511 - - gmx:100814643 1415.98