Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3481 ATGTCGCCGGCGGCGATGCACTTCCCTTCTCCGATCAACTCCGATGATACAACTCCGCACTCTCCTCCCCGTTTCGCTGCTTTCAACGCGGACGCCGTTAACCCTTCCACCGGTGCTGCCGGTTCAACCGTCCGTGGAAGGTCGCGGCCTAGACTGGCGAAACTGAGGAAGCAATCGGTGTCTCAGACCGCAAGGTCTAGAAGCAGAACCGCCACTGCAGTTGAGGAAGAAGGTTCTGGTTCCGGCTTCAATCCTTTTCGCTCCGATCAGGTATGTGATAGCGTTAGTATCGGTAGCGAGGGTTTTGTTTTTGCTGCTAGAAAAGTTGATTCTGATTCTGTTAGGGATTTGAATTCGGAACAGAGAGAAAGCTGCGGTGTAGAATTTGTGTTTAGTGCTAAACAAATTGATGAAAAAATTGATGATAAATCGAATTCGATTCCTTATAGAGAGGAAAAGAATGGTGAAAATGAGAAATTAAACTCGGAAAGGGAGAAGGGGGAGGTTAATTTTACAGGTTTTGTTTTTGGTGCTGTTAGAAATGATTTGCCTTCTAGTTTTAATGTCGAAAAAGAAAAATCTAGTGTACCTGTGTGGAATTCAGGGTATGCTGATTATGGGGAGAGGGAATGTGAAAATGAATTTGTGTTTGGAAAGCAGGAATCTGTTGACAATATGAGAAATTCGGGTAATGGAAGCAGTGTTTTTCATGCTGAGACGGAAACGAATAATAATTTTCATAAAGGTGATGATAAGTGTGGCAATTTGGGTGATGATATTAGGTCGAAGAGTGGAAATGGAAGTGCTAATGGGTTTTCTGCTACTTTTAATGATATTCCTGATAGTGAATTAGTAGATGAGATAAAGAAACTGAACATCAACAATCATGAGGGTGTTCGTATTGCTAGAGATTCTACGAATTCTCATGTAAGTAGTAGTAATGGTTTTGTGTTTGGAGGGAGTGACAAGGTTTCTAGTGTTAGTTCGGGAACTGATACTGGCGGTGAACAGTTGTATACTGATGCTGATTTTGAGAATAATGGTGGGCAATATCCCAATGCCTGCAGAACAAATGATGTTCGAAATGGAACTGCTCGTGATATTGCTCAGGATGCTACAGAAAAACCTTGTTCTAAGACATCTACTAGTCAGAATGGGATCAGAGATTTTGAGTGTGGCAAAATTCCAGAATTTGACGTGTCTGAAGATGCTCAAGTGAATGGAGCTGAAGAGTCTTTTATGGACTTTAAACCTCCGGCATGGGATCCTTCTTGTTTTAAAGATAACTTATTTTGTAAGTTGAATAAAAAATCCGAACCCACATGTAAGAGTAAATCTTTCAAAGAAAAAGGACCAAAATATATGAGACGAAAAGTGAAGTCACATTCCTTGAATAAGAAACAGACAAGGCTAGATCATTTGCCAAAGGAAAACAATTCACTTGAAACCCCTGAATCTTCTGGCGGCTTCTCTCCAATGGATTTGTCTCCCTATCAGGAAACAACAGCAGATGATCAAGATCTAAAGGCTTCGGAAGAATTAAATGTTCTGCACCCAACAATTTCTACTGATTGTAAAGATGATCAGAGATGTGGAGATCTTGATAATGGCCCTGCAACAGTCTGGCCTAAGATGCAAGCTGAAGTGTTCGGCAGTAGCTTTTCTAGCGTTTCAGAAGATGCTGGGGTTGACCTCACCTCAAACTCTGAAAAGAAAAATGCTGATATATTATTTGTTAATGGTCTGGGTGATTTGAAGGAGAAAGATTTTGCATTTTCTGCAGGATCCACTGTAGAGGGCACTCCATTATATAAGCATAAACAGAAGAAGAAATTTAGGAGGAAAATTGGGCGTGACTCATTTGTTATCTCTCCAAATGTGAATGGAAAGCCTGTATCTTCAGTACAATTTTCACCACTTACCACTGCCAACATGTCATCACATTCTGATTTGATGGACAAGTCTCAGATGAATGGTCTTTTTGAGGAAGGGGGTGATGCGTCATTGGCTACAATTCATGCAGCCTGTCAACAATGGAGACTCAGGGGGAACCGTGCTCATAACGCTAAGGATCTTTCTAAAGCTGAAGAATTCTACACAAAGGGAATAAATTCTGTCCCTTCTAGTGAAAAATCAGGATGCTGCATTAAGCCTCTTTTACTGTGCTATAGCAACCGTGCAGCAACACGTATGAGTCTTGGAAGGATTAAAGAAGCTCTAGAGGATTGCATGATGGCTTCTTCTTTGGACCCCACCTTTCTGAAAGTACAGTTGAGAACTGCTAACTGTTACCTTTTGCTAGGGGAAGTAGAAAATGCTCAGCGATGTTATAACAAGTGCTTGGAATCAGGTAAAGTTGTTTGTTTGGATCGGAGAGTAATAGTAGAAGCAGCTGAAGGTTTACAGAAAGCTCAGGAAGTGGTTAAGGGCATGAATGATGCTGCTGAACTTTTGAAGGAGAGGACTTCTGATGCAGCTGGTTCTGCTTTAGAACTACTTACAAAGGCATTGTCAAAAAGTTTATACTCAGAAAGATTGCTCCAAATGAAGGCGGAGGCTCTGTATTTGCTGCAAAAGTATGATGCAGCAGTTCAGCTTTGTGAACAGAGTCTAAATCTTGCAGAAAAGAATTTTGCCCCGGCAAACAGTGCAGACAATACCAATAATTCCATGCATGATAGTTACTTAAGTGTAAAATTGTGGAGATGGGCATTGATATCTAAGTGTTACTTTCGTTTGGGAAGGCTTGATGCATCACTTAGTGCTATTGAAAATATACAGCAAACAGCATCTGTCAATGACAAGTGTGTGATCGATAACATTGAAGACTTGCTGTCATTAGCTGCTACAATACAAGAACTTTTGGACCACAGGAAAGCAGGAAATGAGAACTTTAAATCGGGAGAGTATACAGCAGCAGTGGAGAACTACACTGCTGCTTTATCTACTAATATCAAATCACGCCCTTTTGCAGCAATTTGTTTTGGCAACCGTGCTGCTGCTCATCAAGCTTCAAGCCAAATTGTTGATGCCATTGCGGACTGCAGCATGGCTATGGCCCTTGATGAAAATTATGCAAAGGCAATTTCTAGAAGAGCCACCTTGCATGAAATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAGGAGACTTATTTCTATTCTTGGATCTCAATCCAATGAAAAGGCCAGACATTCTGAATCACCAAATGGATCAATTGGTGGGAAAGAATCAAGGCAAGCTAAACAGCGTCTGCTTACTGTGGAAGATCAAGCCAAAATGGAGACCCCCTTGGACTTTTATCTCATTTTAGGAATTAAACCAGCTGATACAACAGCTGATATCAAGAAGGCATATCACAAGGCAGCTCTTAGACATCATCCAGATAAGGCTGGTCAGTTGTTGGCAAGAAGTGAAGTTGGGGATGAAGGCAGTGTCTGGAAGGAAATTTCCCAGGAGGTGCACAAGGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCATATGCTGTACTTTCAGACCCTGCGAAGCGCTCAGAGTATGATATGGAGGAGGACATAAGGAAAATTTACAAACAAAGGAACGGAGGTGGCGCATGCAGGAGATCTTCAGATGTTTATGGAAATGGAAGATCACCCGATGGTTATAGATCTTCCTATGACAGAACTTCTAACAGACGATATGGACATCATTATAGAACATATGGAGATTCATATTCTCGATGGTAA 3732 0.4137 MSPAAMHFPSPINSDDTTPHSPPRFAAFNADAVNPSTGAAGSTVRGRSRPRLAKLRKQSVSQTARSRSRTATAVEEEGSGSGFNPFRSDQVCDSVSIGSEGFVFAARKVDSDSVRDLNSEQRESCGVEFVFSAKQIDEKIDDKSNSIPYREEKNGENEKLNSEREKGEVNFTGFVFGAVRNDLPSSFNVEKEKSSVPVWNSGYADYGERECENEFVFGKQESVDNMRNSGNGSSVFHAETETNNNFHKGDDKCGNLGDDIRSKSGNGSANGFSATFNDIPDSELVDEIKKLNINNHEGVRIARDSTNSHVSSSNGFVFGGSDKVSSVSSGTDTGGEQLYTDADFENNGGQYPNACRTNDVRNGTARDIAQDATEKPCSKTSTSQNGIRDFECGKIPEFDVSEDAQVNGAEESFMDFKPPAWDPSCFKDNLFCKLNKKSEPTCKSKSFKEKGPKYMRRKVKSHSLNKKQTRLDHLPKENNSLETPESSGGFSPMDLSPYQETTADDQDLKASEELNVLHPTISTDCKDDQRCGDLDNGPATVWPKMQAEVFGSSFSSVSEDAGVDLTSNSEKKNADILFVNGLGDLKEKDFAFSAGSTVEGTPLYKHKQKKKFRRKIGRDSFVISPNVNGKPVSSVQFSPLTTANMSSHSDLMDKSQMNGLFEEGGDASLATIHAACQQWRLRGNRAHNAKDLSKAEEFYTKGINSVPSSEKSGCCIKPLLLCYSNRAATRMSLGRIKEALEDCMMASSLDPTFLKVQLRTANCYLLLGEVENAQRCYNKCLESGKVVCLDRRVIVEAAEGLQKAQEVVKGMNDAAELLKERTSDAAGSALELLTKALSKSLYSERLLQMKAEALYLLQKYDAAVQLCEQSLNLAEKNFAPANSADNTNNSMHDSYLSVKLWRWALISKCYFRLGRLDASLSAIENIQQTASVNDKCVIDNIEDLLSLAATIQELLDHRKAGNENFKSGEYTAAVENYTAALSTNIKSRPFAAICFGNRAAAHQASSQIVDAIADCSMAMALDENYAKAISRRATLHEMVRDYEQAACDLRRLISILGSQSNEKARHSESPNGSIGGKESRQAKQRLLTVEDQAKMETPLDFYLILGIKPADTTADIKKAYHKAALRHHPDKAGQLLARSEVGDEGSVWKEISQEVHKDADRLFKMIGEAYAVLSDPAKRSEYDMEEDIRKIYKQRNGGGACRRSSDVYGNGRSPDGYRSSYDRTSNRRYGHHYRTYGDSYSRW* 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3481 1243 Coils Coil 801 821 - -
Mal3g3481 1243 SMART tpr_5 954 987 IPR019734 GO:0005515
Mal3g3481 1243 SMART tpr_5 844 877 IPR019734 GO:0005515
Mal3g3481 1243 SMART tpr_5 754 787 IPR019734 GO:0005515
Mal3g3481 1243 SMART tpr_5 900 933 IPR019734 GO:0005515
Mal3g3481 1243 SMART tpr_5 720 753 IPR019734 GO:0005515
Mal3g3481 1243 SMART tpr_5 992 1025 IPR019734 GO:0005515
Mal3g3481 1243 SMART tpr_5 1026 1059 IPR019734 GO:0005515
Mal3g3481 1243 SMART tpr_5 676 709 IPR019734 GO:0005515
Mal3g3481 1243 Pfam Tetratricopeptide repeat 761 782 IPR019734 GO:0005515
Mal3g3481 1243 SUPERFAMILY TPR-like 957 1055 IPR011990 GO:0005515
Mal3g3481 1243 MobiDBLite consensus disorder prediction 1060 1078 - -
Mal3g3481 1243 SMART dnaj_3 1099 1178 IPR001623 -
Mal3g3481 1243 Gene3D Tetratricopeptide repeat domain 670 808 IPR011990 GO:0005515
Mal3g3481 1243 MobiDBLite consensus disorder prediction 55 86 - -
Mal3g3481 1243 MobiDBLite consensus disorder prediction 450 464 - -
Mal3g3481 1243 MobiDBLite consensus disorder prediction 1196 1224 - -
Mal3g3481 1243 MobiDBLite consensus disorder prediction 1 86 - -
Mal3g3481 1243 MobiDBLite consensus disorder prediction 480 504 - -
Mal3g3481 1243 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 1243 - -
Mal3g3481 1243 Coils Coil 150 170 - -
Mal3g3481 1243 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 1243 - -
Mal3g3481 1243 ProSitePatterns Nt-dnaJ domain signature. 1163 1182 IPR018253 -
Mal3g3481 1243 ProSiteProfiles dnaJ domain profile. 1100 1186 IPR001623 -
Mal3g3481 1243 Pfam DnaJ domain 1100 1183 IPR001623 -
Mal3g3481 1243 MobiDBLite consensus disorder prediction 441 504 - -
Mal3g3481 1243 SUPERFAMILY Chaperone J-domain 1087 1182 IPR036869 -
Mal3g3481 1243 SUPERFAMILY TPR-like 677 877 IPR011990 GO:0005515
Mal3g3481 1243 MobiDBLite consensus disorder prediction 465 479 - -
Mal3g3481 1243 CDD DnaJ 1100 1175 IPR001623 -
Mal3g3481 1243 Gene3D Tetratricopeptide repeat domain 953 1071 IPR011990 GO:0005515
Mal3g3481 1243 Gene3D DnaJ domain 1087 1199 IPR036869 -
Mal3g3481 1243 Gene3D Tetratricopeptide repeat domain 823 947 IPR011990 GO:0005515
Mal3g3481 1243 MobiDBLite consensus disorder prediction 1060 1081 - -
Mal3g3481 1243 Coils Coil 857 877 - -
Mal3g3481 1243 PRINTS DnaJ domain signature 1102 1120 IPR001623 -
Mal3g3481 1243 PRINTS DnaJ domain signature 1120 1135 IPR001623 -
Mal3g3481 1243 PRINTS DnaJ domain signature 1158 1178 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3481 Mal-Chr3 111797556 111807873 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3481 K09527 - gmx:100809278 1427.92