Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3476 ATGCAATTTTCAACTCGTCTCCATCTCTTTGCAAGACCTTTACTCTCTTCCTCCTCTCTCCTTTACCCTTCGCGCCAGAATGGAATTAGAGAAATAATGAGCAGGATTGGCATGAACACCTGCTCGCTTTCTTCTACAGTTTCAGCTGAAGCTTCAGATTTAGAATGTGATGAGATCCATGATGATGTCAAAGCAGCAGAGAAAAATAACGCACTTTGTTTGGCTGTCTCTCAACTCGAAAGCGAGTTTACCAAGGAGTCAAGGTTATCTTTTCAAAAGTTTTTTGGTGTACGCCATGCCAATGTGGTATCTACGGGCTCTTTGAAGCTTGACATAGCTCTTGGAATTGGAGGATTACCAAAGGGTAGGATTGTTGAAATTTATGGACGAGAAGCAGCTGGTAAGACAACACTTGCCCTTCATATTATTAAAGAAGCTCAAAAGCTTGGAGGATATTGTGCATATCTTGATGTAGAAAGTGCATTAGACCTTTCACTTGTGGAGTCAATGGGTGTAAATACTAAAAACCTTCTCATCTCAAATCCTGATTGTGCTGAAAACTTGTTGAGCATGGTTGATACACTAACAAAAAGTGGAGCTGTTGACGTGATTGTGGTTGATAGTGTTGCTGCTCTTGTCCCGAAATGCGAACTTGATCAATTAGGAGTTGCTACAAATCACGATTTGCATTCGCGAATAATGACTCAAGCACTACGGAAAATTCATTATTCATTATCCCGCTCCCAAACTCTCTTAATTTTTGTTAATCAGGTTAGATTTAGTCCAAAAGCATTCGGGGGACGCGGACCTATGGAAGAGGTCACCTGTGGTGGAAACGCTTTGAGATTCTATGCAGCTGTTCGTTTGCGACTTTCAAGAATGGGATTGATAAAAACTGAAGATAAGGTTGAGGGTATCACAGTCTGTGCGCAAGTGGTAAAAAATAAACTAGCACTGGCAGCAATGAAAAAAGCTGAACTGGGTATAAAGTTTGGAAGAGGCTTTTGCCAAGAATCAGAGGTCTTTGATTTGGCTTGTGAACATGGACTCATTATGAAAGATGAGGGAAACTACTTTATCGAAGGGGAGGCATTTAGTAGTAGAAATGCTGCTGAACGATTTTTGGCTAAAAATAAAAGGATTTGTGACAAGTTAGTTATGGACATGAAAAGACTTTATCTTTAA 1185 0.4017 MQFSTRLHLFARPLLSSSSLLYPSRQNGIREIMSRIGMNTCSLSSTVSAEASDLECDEIHDDVKAAEKNNALCLAVSQLESEFTKESRLSFQKFFGVRHANVVSTGSLKLDIALGIGGLPKGRIVEIYGREAAGKTTLALHIIKEAQKLGGYCAYLDVESALDLSLVESMGVNTKNLLISNPDCAENLLSMVDTLTKSGAVDVIVVDSVAALVPKCELDQLGVATNHDLHSRIMTQALRKIHYSLSRSQTLLIFVNQVRFSPKAFGGRGPMEEVTCGGNALRFYAAVRLRLSRMGLIKTEDKVEGITVCAQVVKNKLALAAMKKAELGIKFGRGFCQESEVFDLACEHGLIMKDEGNYFIEGEAFSSRNAAERFLAKNKRICDKLVMDMKRLYL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3476 394 ProSiteProfiles RecA family profile 2. 265 340 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Mal3g3476 394 ProSiteProfiles RecA family profile 1. 99 258 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Mal3g3476 394 PANTHER DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL 19 394 - -
Mal3g3476 394 SMART AAA_5 121 295 IPR003593 -
Mal3g3476 394 Pfam recA bacterial DNA recombination protein 71 335 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mal3g3476 394 ProSitePatterns recA signature. 280 288 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Mal3g3476 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 317 IPR027417 -
Mal3g3476 394 Gene3D - 97 392 IPR027417 -
Mal3g3476 394 PRINTS RecA protein signature 277 305 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mal3g3476 394 PRINTS RecA protein signature 191 220 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mal3g3476 394 PRINTS RecA protein signature 229 258 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mal3g3476 394 PRINTS RecA protein signature 311 340 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mal3g3476 394 PRINTS RecA protein signature 157 186 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mal3g3476 394 PRINTS RecA protein signature 364 381 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mal3g3476 394 PANTHER RECA 19 394 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3476 Mal-Chr3 111744316 111749571 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3476 - - gmx:100777423 575.089