Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3456 ATGGCTTTTCTGTTCTCTACAATTGCACTTCCCTCCACTAACCTCACTTCCAAACTACCTATCTTCAACAACACTTCACAAATTCACGCACTTCGCCATTTCGCAGATACTACTAAACGCTTTCATAAAGCTTCGTCCTTTATCGCTTTTGCTGTGAACGGTAACCCCACCATAAGAAAAACCACTCCCAGACGAGATAGTAGAAAACCACTTTTGAGTGAAGGAAGAGATGAAGATGAAGCTCTTGGACCCTTTTGCCCTGGTTGTGGAATTTTCATGCAAGATAATGATCCAAATCTTCCTGGTTTTTACCAACAAAGAGAGGTAAAAATTGAAGAGGATTATGAATTTGATGATGAAGATGATGATGGTGAACAAGAAGCTAATGGGTCAATTGATGATGAGTCTGATTGGGATTCTGATGAGTTGGAAGCTATGTTACTTGGTGAAGAAAATGATGATAAGATTGATTTGGATGGGTTTACACATGCAGGGGTTGGTTATGGTAATGTTACTGAGGAGGTTTTGGAGAGGGCTAAGAAGAAGAAGGTTTCAAAAGCTGAGAAGAAGAGAATGGCTAGGGAAGCTGAGAAGGTGAAAGAAGAGGTTACTGTTTGTGCTAGGTGTCATTCCTTGAGAAATTATGGGCAGGTGAAGAATTATACGGCGGAGAATTTGATACCGGATTTCGATTTCGATAGGTTGATTTCTACTAGGTTAATGAATCCTGCTGGTAGTGGTAGTTCTACTGTTGTTGTTATGGTTGTGGATTGTGTTGATTTTGATGGTTCTTTCCCGAGAACGGCTGTGAAGTCGTTGTTTAAGGCGTTGGAAGGTATGCAGGAGAATTCGAAGAAGGGTAAGAAACTGCCAAAGCTTGTTCTTGTGGCTACAAAGGTTGATCTCCTTCCGTCGCAGGTTTCTCCTACGAGGTTAGATAGATGGGTTCGACACCGTGCAAGTGCTGGAGGAGCGCCTAAGTTAAGTGCGGTTTATTTGGTCAGTTCTCGAAAGGATTTAGGTGTGAGGAATGTGTTGTCGTTCGTAAAGACTTTGGCTGGTCCTCGTGGGAATGTTTGGGTTATTGGGGCTCAAAATGCTGGGAAGTCTACTCTGATCAATGCATTTGCGAAGAAAGAAGGAGCCAAAGTTACAAAGCTCACGGAAGCTCCGGTTCCTGGGACGACGCTTGGGATCTTGAGGATTGCAGGAATTTTGTCGGCTAAGGCTAAGATGTTTGACACTCCAGGGCTCTTACATCCATATTTATTGTCGATGAGATTGAATCGGGAGGAACAAAAGATGGTTGAGATACGGAAGGAACTTAAACCTCGGTCATATAGAATTAAGGCTGGACAAGCTATACATGTTGGTGGCTTGGCAAGACTTGACCTAATTGAAGCCTCTGTTCAAACAATGTATGTCACTGTTTGGGCATCACCAAATGTTTCTCTACACATGGGAAAAATAGAAAATGCTAATGAGATTTGGAATAATCATGTTGGCGTCAGGCTGCAGCCTCCCATCGGTGATGACCGCGCAGCTGAACTAGGTACCTGGAAAGAAAGGGAAGTAAAAGTATCTGGATCTAGTTGGGATGTCAATTGCATTGACATAGCAATAGCTGGTCTAGGTTGGTTCTCTTTAGGTATCCAAGGTGAAGCAACCATGAAATTATGGACCTATGATGGAATTGAAATAACTTTGAGAGAACCATTGGTACTTGACCGGGCCCCGTCCCTTGAAAAACCAGGTTTTTGGTTAACAAAAGCTCTATCTGAAGCTGTTGGCAACCAAACTAAACTTGAAGCTCAAAGAAAGAAAAAACTTGAAGATGAAGATACAGAATATGTAGGGGCAGGGAAAGAGATATCTGTATGA 1881 0.4248 MAFLFSTIALPSTNLTSKLPIFNNTSQIHALRHFADTTKRFHKASSFIAFAVNGNPTIRKTTPRRDSRKPLLSEGRDEDEALGPFCPGCGIFMQDNDPNLPGFYQQREVKIEEDYEFDDEDDDGEQEANGSIDDESDWDSDELEAMLLGEENDDKIDLDGFTHAGVGYGNVTEEVLERAKKKKVSKAEKKRMAREAEKVKEEVTVCARCHSLRNYGQVKNYTAENLIPDFDFDRLISTRLMNPAGSGSSTVVVMVVDCVDFDGSFPRTAVKSLFKALEGMQENSKKGKKLPKLVLVATKVDLLPSQVSPTRLDRWVRHRASAGGAPKLSAVYLVSSRKDLGVRNVLSFVKTLAGPRGNVWVIGAQNAGKSTLINAFAKKEGAKVTKLTEAPVPGTTLGILRIAGILSAKAKMFDTPGLLHPYLLSMRLNREEQKMVEIRKELKPRSYRIKAGQAIHVGGLARLDLIEASVQTMYVTVWASPNVSLHMGKIENANEIWNNHVGVRLQPPIGDDRAAELGTWKEREVKVSGSSWDVNCIDIAIAGLGWFSLGIQGEATMKLWTYDGIEITLREPLVLDRAPSLEKPGFWLTKALSEAVGNQTKLEAQRKKKLEDEDTEYVGAGKEISV* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3456 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 249 468 IPR027417 -
Mal3g3456 626 Coils Coil 182 202 - -
Mal3g3456 626 CDD YqeH 206 418 - -
Mal3g3456 626 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 117 617 - -
Mal3g3456 626 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 23 123 - -
Mal3g3456 626 MobiDBLite consensus disorder prediction 58 79 - -
Mal3g3456 626 MobiDBLite consensus disorder prediction 61 79 - -
Mal3g3456 626 Gene3D - 245 421 IPR027417 -
Mal3g3456 626 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 117 617 - -
Mal3g3456 626 MobiDBLite consensus disorder prediction 116 139 - -
Mal3g3456 626 Pfam 50S ribosome-binding GTPase 359 434 IPR006073 GO:0005525
Mal3g3456 626 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 23 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3456 Mal-Chr3 111519061 111523321 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3456 - - gmx:100805561 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3456 3 111519061 111523321 Mal3g3456 3 111519061 111523321 ECH