Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3444 ATGGGATCCGAAACACAGTCTTCTCAAATAATTCCTGTCGTTGACTTTTCCGACCAAAACATGAAACCTGGTACTGAAACATGGATCTTAGCTTGCAATGTTGTGAGGACTTCACTAGAAGACTATGGTTGTTTCGTGGCACACTATGACAAAGTTGGCAAAGAACTTTGCGACTCTGTTATCCTTGGAATTGAAGAATTATTTGGTCTCCCTTTGGAAACAAAAGTGCAAAAGACAAGTGATAGGCCTTTCCATGCTTACTTAGGACAAGTCCCATGGCTTCCCTTATATGAATCTTTGGCCATCCAAGATCCATTAACTATGCTTGGATGTCAAAAATTCGCCCAAATCATGTGGCCTCAAGGAAATGATCGTTTTTGTGAAAGCATCAACAAGTACTCCAAGCTATTGGGAGAATTAGACAATATTGCCAAGAGGATGGTGTTTGAGAGCTATGGTGTGGATGTGAAAATATGCGATTCATTGAATGAATCAAACAATTATCTCCTTCGATGCATGAAATACAGAACACGAGAGATGGATGAAAAGGATATGGGATTGCAACCTCACTCGGACATAACCATTATATCTGTCGTACATCAGCTTAATAATCTAAATGGCTTGGAAATCAAATTGAAGAATGGAGAGTGGATTGGGGTTGATGCCTCACCCTCCTCCTTTGTTGTCATGGCAGGTGATGCATTCAAGGTGTGGAGCAATGGGAGGATACGTGCATGTGAACACAAAGTTACAATGAATGCAAAGAAAACAAGATATTCAACGGGACTATTTTCTTTTGGTAGTAAGATGATGGAGATACCAAAGGAGCTAGTGAATGAAGAACATCCCTTGCAATATAAACCAACATTCGACCATTATGACTACATTCGTTTCTATGAGAAAACGAAAATGAAAGAACCTAGTTCACGTATTGAAGCATATTGTGGAATTAATTTGAAGTCTACGACCATATGA 975 0.3938 MGSETQSSQIIPVVDFSDQNMKPGTETWILACNVVRTSLEDYGCFVAHYDKVGKELCDSVILGIEELFGLPLETKVQKTSDRPFHAYLGQVPWLPLYESLAIQDPLTMLGCQKFAQIMWPQGNDRFCESINKYSKLLGELDNIAKRMVFESYGVDVKICDSLNESNNYLLRCMKYRTREMDEKDMGLQPHSDITIISVVHQLNNLNGLEIKLKNGEWIGVDASPSSFVVMAGDAFKVWSNGRIRACEHKVTMNAKKTRYSTGLFSFGSKMMEIPKELVNEEHPLQYKPTFDHYDYIRFYEKTKMKEPSSRIEAYCGINLKSTTI* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3444 324 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 6 316 - -
Mal3g3444 324 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 316 - -
Mal3g3444 324 SUPERFAMILY Clavaminate synthase-like 10 303 - -
Mal3g3444 324 Gene3D - 9 322 IPR027443 -
Mal3g3444 324 Pfam 2OG-Fe(II) oxygenase superfamily 166 264 IPR044861 -
Mal3g3444 324 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 268 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3444 Mal-Chr3 111418125 111419709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3444 128 289 Glycosyltransferase AT5G59530 29.167 6.10e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3444 - - gmx:100775440 510.76